Information for 6-GGACAAGGCT (Motif 9)

C A T G C T A G C T G A T G A C C G T A C T G A C T A G A C T G G A T C A G C T
Reverse Opposite:
C T G A C T A G A G T C A G T C A G C T A C G T A C T G G A C T A G T C G T A C
p-value:1e-9
log p-value:-2.103e+01
Information Content per bp:1.835
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif137.8
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets30.5 +/- 26.0bp
Average Position of motif in Background54.7 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----GGACAAGGCT--
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T C A T G C T A G C T G A T G A C C G T A C T G A C T A G A C T G G A T C A G C T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGACAAGGCT-
AGGTCAAGGTCA
 A C G T C A T G C T A G C T G A T G A C C G T A C T G A C T A G A C T G G A T C A G C T A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGACAAGGCT
VRRACAAWGG-
 A C G T C A T G C T A G C T G A T G A C C G T A C T G A C T A G A C T G G A T C A G C T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGACAAGGCT-
AGGTCAAGGTCA
 A C G T C A T G C T A G C T G A T G A C C G T A C T G A C T A G A C T G G A T C A G C T A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGACAAGGCT
--ACAAAG--
 C A T G C T A G C T G A T G A C C G T A C T G A C T A G A C T G G A T C A G C T
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGACAAGGCT
GGAACAAAGR-
 A C G T C A T G C T A G C T G A T G A C C G T A C T G A C T A G A C T G G A T C A G C T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGACAAGGCT---
---CAAGGHCANV
 C A T G C T A G C T G A T G A C C G T A C T G A C T A G A C T G G A T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGACAAGGCT
AAAACAATGG-
 A C G T C A T G C T A G C T G A T G A C C G T A C T G A C T A G A C T G G A T C A G C T
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGACAAGGCT-
-NTCAAGGTCA
 C A T G C T A G C T G A T G A C C G T A C T G A C T A G A C T G G A T C A G C T A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGACAAGGCT---
AAGTTCAAGGTCAGC
 A C G T A C G T C A T G C T A G C T G A T G A C C G T A C T G A C T A G A C T G G A T C A G C T A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C