Information for 6-AGTAAGAACAAGA (Motif 5)

C G T A C A T G A G C T C G T A C G T A C A T G C G T A C G T A A G T C G T C A C G T A A C T G G T C A
Reverse Opposite:
A C G T A G T C A C G T A C G T A C T G A C G T A C G T G T A C A C G T A C G T C T G A G T A C C G A T
p-value:1e-14
log p-value:-3.265e+01
Information Content per bp:1.793
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.2 +/- 19.0bp
Average Position of motif in Background59.1 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGTAAGAACAAGA--
AAAAATAACAAACGG
 C G T A C A T G A G C T C G T A C G T A C A T G C G T A C G T A A G T C G T C A C G T A A C T G G T C A A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGTAAGAACAAGA-
AACAAACAACAAGAG
 A C G T C G T A C A T G A G C T C G T A C G T A C A T G C G T A C G T A A G T C G T C A C G T A A C T G G T C A A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGTAAGAACAAGA-
NTTNAGAACAATTA
 C G T A C A T G A G C T C G T A C G T A C A T G C G T A C G T A A G T C G T C A C G T A A C T G G T C A A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGTAAGAACAAGA-
ATGTCACAACAACAC
 A C G T C G T A C A T G A G C T C G T A C G T A C A T G C G T A C G T A A G T C G T C A C G T A A C T G G T C A A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTAAGAACAAGA----
-TTAAGAACAATAAATT
 C G T A C A T G A G C T C G T A C G T A C A T G C G T A C G T A A G T C G T C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T
A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0073.1_Sox7_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGTAAGAACAAGA--------
AATAAAGAACAATAGAATTTCA
 A C G T C G T A C A T G A G C T C G T A C G T A C A T G C G T A C G T A A G T C G T C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGTAAGAACAAGA----
-TTTAGAACAATAAAAT
 C G T A C A T G A G C T C G T A C G T A C A T G C G T A C G T A A G T C G T C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T
A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGTAAGAACAAGA
CAAACAACAACACCT
 A C G T A C G T C G T A C A T G A G C T C G T A C G T A C A T G C G T A C G T A A G T C G T C A C G T A A C T G G T C A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGTAAGAACAAGA-----
-TNNAGAACAATANATNN
 C G T A C A T G A G C T C G T A C G T A C A T G C G T A C G T A A G T C G T C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGTAAGAACAAGA---
NNTNANAACAATTNNA
 C G T A C A T G A G C T C G T A C G T A C A T G C G T A C G T A A G T C G T C A C G T A A C T G G T C A A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A