p-value: | 1e-14 |
log p-value: | -3.340e+01 |
Information Content per bp: | 1.779 |
Number of Target Sequences with motif | 17.0 |
Percentage of Target Sequences with motif | 2.02% |
Number of Background Sequences with motif | 61.2 |
Percentage of Background Sequences with motif | 0.13% |
Average Position of motif in Targets | 34.7 +/- 24.2bp |
Average Position of motif in Background | 44.0 +/- 32.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGGCTGGTAGCA- CTGGCAGNCTGCCA |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGGCTGGTAGCA TWGTCTGV----- |
|
|
|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGGCTGGTAGCA CTGTCTGG----- |
|
|
|
PB0029.1_Hic1_1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTGGCTGGTAGCA- NGTAGGTTGGCATNNN |
|
|
|
POL010.1_DCE_S_III/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTGGCTGGTAGCA --NGCTN------ |
|
|
|
PB0154.1_Osr1_2/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGGCTGGTAGCA--- NNNTTAGGTAGCNTNT |
|
|
|
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGGCTGGTAGCA CWGGCGGGAA--- |
|
|
|
Hic1/MA0739.1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTGGCTGGTAGCA --GGTTGGCAT-- |
|
|
|
PB0164.1_Smad3_2/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTGGCTGGTAGCA NAGANTGGCGGGGNGNA |
|
|
|
PB0060.1_Smad3_1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTGGCTGGTAGCA NNTNNTGTCTGGNNTNG |
|
|
|