Information for 8-AATTTTGAAA (Motif 13)

T C G A C G T A A C G T C G A T G C A T C G A T C T A G C T G A G C T A C G T A
Reverse Opposite:
G C A T C G A T G A C T G A T C G C T A C G T A G C T A T G C A G C A T A G C T
p-value:1e-9
log p-value:-2.178e+01
Information Content per bp:1.653
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.41%
Number of Background Sequences with motif1166.5
Percentage of Background Sequences with motif2.45%
Average Position of motif in Targets51.8 +/- 31.8bp
Average Position of motif in Background51.5 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:AATTTTGAAA---
---TTTGAAACCG
 T C G A C G T A A C G T C G A T G C A T C G A T C T A G C T G A G C T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AATTTTGAAA---
ANATTTTTGCAANTN
 A C G T A C G T T C G A C G T A A C G T C G A T G C A T C G A T C T A G C T G A G C T A C G T A A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AATTTTGAAA--
CTAATATTGCTAAA
 A C G T A C G T T C G A C G T A A C G T C G A T G C A T C G A T C T A G C T G A G C T A C G T A A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AATTTTGAAA--
CTAATATTGCTAAA
 A C G T A C G T T C G A C G T A A C G T C G A T G C A T C G A T C T A G C T G A G C T A C G T A A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AATTTTGAAA-
--ATTTGAATT
 T C G A C G T A A C G T C G A T G C A T C G A T C T A G C T G A G C T A C G T A A C G T
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AATTTTGAAA-
NATTGTGCAAT
 T C G A C G T A A C G T C G A T G C A T C G A T C T A G C T G A G C T A C G T A A C G T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AATTTTGAAA-
BAGTCATANTGAAAG
 A C G T A C G T A C G T A C G T T C G A C G T A A C G T C G A T G C A T C G A T C T A G C T G A G C T A C G T A A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AATTTTGAAA-
-RTTATGYAAB
 T C G A C G T A A C G T C G A T G C A T C G A T C T A G C T G A G C T A C G T A A C G T
A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

PB0176.1_Sox5_2/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AATTTTGAAA
NNCTNAATTATGANN
 A C G T A C G T A C G T A C G T A C G T T C G A C G T A A C G T C G A T G C A T C G A T C T A G C T G A G C T A C G T A
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AATTTTGAAA
NATGTTGCAA
 T C G A C G T A A C G T C G A T G C A T C G A T C T A G C T G A G C T A C G T A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A