Information for 5-CWGWGGCAKCTKCMRG (Motif 6)

A G T C C G T A A C T G C G T A A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C G T A C C T G A A C T G
Reverse Opposite:
A G T C A G C T A C T G A C T G G T A C C G T A A C T G G T A C A C G T A C T G A G T C A G T C G C A T A G T C C G A T A C T G
p-value:1e-10
log p-value:-2.526e+01
Information Content per bp:1.857
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.4 +/- 16.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CWGWGGCAKCTKCMRG-
NNNNAGCAGCTGCTGAN
 A G T C C G T A A C T G C G T A A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C G T A C C T G A A C T G A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Myod1/MA0499.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CWGWGGCAKCTKCMRG
-NGNGACAGCTGCN--
 A G T C C G T A A C T G C G T A A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C G T A C C T G A A C T G
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CWGWGGCAKCTKCMRG
----GACAGCTGCAG-
 A G T C C G T A A C T G C G T A A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C G T A C C T G A A C T G
A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CWGWGGCAKCTKCMRG
--NNAGCAGCTGCT--
 A G T C C G T A A C T G C G T A A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C G T A C C T G A A C T G
A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CWGWGGCAKCTKCMRG
---NNACAGCTGC---
 A G T C C G T A A C T G C G T A A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C G T A C C T G A A C T G
A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CWGWGGCAKCTKCMRG
----CGCAGCTGCG--
 A G T C C G T A A C T G C G T A A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C G T A C C T G A A C T G
A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CWGWGGCAKCTKCMRG
----AGCAGCTGCT--
 A G T C C G T A A C T G C G T A A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C G T A C C T G A A C T G
A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CWGWGGCAKCTKCMRG
----NVCAGCTGBBNN
 A G T C C G T A A C T G C G T A A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C G T A C C T G A A C T G
A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CWGWGGCAKCTKCMRG
----AACAGCTGCAG-
 A G T C C G T A A C T G C G T A A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C G T A C C T G A A C T G
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CWGWGGCAKCTKCMRG
-----NCAGCTGCTG-
 A G T C C G T A A C T G C G T A A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C G T A C C T G A A C T G
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T