Information for 9-CCTCGAGTAT (Motif 12)

A G T C A G T C A G C T A G T C C T A G C G T A A C T G A C G T C G T A A C G T
Reverse Opposite:
G T C A A C G T G T C A A G T C A C G T A G T C C T A G C T G A A C T G A C T G
p-value:1e-7
log p-value:-1.637e+01
Information Content per bp:1.880
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.5 +/- 14.7bp
Average Position of motif in Background55.5 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCTCGAGTAT-
-CTYRAGTGSY
 A G T C A G T C A G C T A G T C C T A G C G T A A C T G A C G T C G T A A C G T A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCTCGAGTAT
-NTCAAGTGG
 A G T C A G T C A G C T A G T C C T A G C G T A A C T G A C G T C G T A A C G T
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:3
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------CCTCGAGTAT-----
ACCGCCNTCCACGTGTANNGACA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G T C C T A G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A T C G A T C C A T G T A G C G A T C G A C T C A G T T G A C G T A C C T G A A G T C T C A G G A C T A C T G A C G T G T C A C T G A G A C T T A C G C T G A G A T C C T G A

Tcfl5/MA0632.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCTCGAGTAT
GGCACGTGCC-
 A C G T A G T C A G T C A G C T A G T C C T A G C G T A A C T G A C G T C G T A A C G T
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCTCGAGTAT-
TTGCCCGGATTAGG
 A C G T A C G T A C G T A G T C A G T C A G C T A G T C C T A G C G T A A C T G A C G T C G T A A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCTCGAGTAT-
NTCCCCTCAGGGANT
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G T C C T A G C G T A A C T G A C G T C G T A A C G T A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCTCGAGTAT--
--TTRAGTGSYK
 A G T C A G T C A G C T A G T C C T A G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCTCGAGTAT-
NTCGCCTCAGGCAAT
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G T C C T A G C G T A A C T G A C G T C G T A A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCTCGAGTAT-
-BTBRAGTGSN
 A G T C A G T C A G C T A G T C C T A G C G T A A C T G A C G T C G T A A C G T A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCTCGAGTAT---
TTGACCGAGAATTCC
 A C G T A C G T A G T C A G T C A G C T A G T C C T A G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C