Information for 10-GGCACGTTCC (Motif 14)

T C A G A T C G G T A C G C T A T A G C T A C G G C A T A C G T G A T C G T A C
Reverse Opposite:
C A T G C T A G T G C A C G T A A T G C A T C G C G A T C A T G T A G C A G T C
p-value:1e-2
log p-value:-5.127e+00
Information Content per bp:1.741
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif112.9
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets79.6 +/- 16.1bp
Average Position of motif in Background48.6 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HES7/MA0822.1/Jaspar

Match Rank:1
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GGCACGTTCC-
TGGCACGTGCCA
 A C G T T C A G A T C G G T A C G C T A T A G C T A C G G C A T A C G T G A T C G T A C A C G T
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

HES5/MA0821.1/Jaspar

Match Rank:2
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GGCACGTTCC-
CGGCACGTGCCA
 A C G T T C A G A T C G G T A C G C T A T A G C T A C G G C A T A C G T G A T C G T A C A C G T
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

HEY2/MA0649.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GGCACGTTCC
GGCACGTGNC
 T C A G A T C G G T A C G C T A T A G C T A C G G C A T A C G T G A T C G T A C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C

HEY1/MA0823.1/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGCACGTTCC
GACACGTGCC
 T C A G A T C G G T A C G C T A T A G C T A C G G C A T A C G T G A T C G T A C
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C

Hes2/MA0616.1/Jaspar

Match Rank:5
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GGCACGTTCC----
-GCACGTGTCNNNN
 T C A G A T C G G T A C G C T A T A G C T A C G G C A T A C G T G A T C G T A C A C G T A C G T A C G T A C G T
A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GGCACGTTCC-
-GCACGTACCC
 T C A G A T C G G T A C G C T A T A G C T A C G G C A T A C G T G A T C G T A C A C G T
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GGCACGTTCC
-GCACGTNC-
 T C A G A T C G G T A C G C T A T A G C T A C G G C A T A C G T G A T C G T A C
A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GGCACGTTCC
-GCACGTAY-
 T C A G A T C G G T A C G C T A T A G C T A C G G C A T A C G T G A T C G T A C
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGCACGTTCC
NGKCACGTGM-
 A C G T T C A G A T C G G T A C G C T A T A G C T A C G G C A T A C G T G A T C G T A C
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGCACGTTCC
BGCACGTA--
 T C A G A T C G G T A C G C T A T A G C T A C G G C A T A C G T G A T C G T A C
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T