Information for 5-TGGAGGCACCATT (Motif 8)

A C G T A C T G A C T G C G T A A C T G A C T G G T A C C G T A T A G C A G T C C G T A C G A T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A C T G A C G T A C T G G T A C A G T C A C G T A G T C A G T C C G T A
p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.2 +/- 29.2bp
Average Position of motif in Background37.8 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGGAGGCACCATT-
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C T G G T A C C G T A T A G C A G T C C G T A C G A T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGGCACCATT
GTGGAT--------
 A C G T A C G T A C T G A C T G C G T A A C T G A C T G G T A C C G T A T A G C A G T C C G T A C G A T A C G T
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:3
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TGGAGGCACCATT
NNNATTGGGGGTNTCCT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C T G G T A C C G T A T A G C A G T C C G T A C G A T A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGGAGGCACCATT----
--AAGTCAGCANTTTTN
 A C G T A C T G A C T G C G T A A C T G A C T G G T A C C G T A T A G C A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGGCACCATT------
AADGAGVCANYASTACAGNC
 A C G T A C G T A C T G A C T G C G T A A C T G A C T G G T A C C G T A T A G C A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGGAGGCACCATT----
NNNNNGAACAATTGANN
 A C G T A C T G A C T G C G T A A C T G A C T G G T A C C G T A T A G C A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TGGAGGCACCATT----
---NNGCACCTTTCTCC
 A C G T A C T G A C T G C G T A A C T G A C T G G T A C C G T A T A G C A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGGAGGCACCATT
GGGCGGGACC---
 A C G T A C T G A C T G C G T A A C T G A C T G G T A C C G T A T A G C A G T C C G T A C G A T A C G T
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:TGGAGGCACCATT-------
---TGTTCCCATTGTGTACT
 A C G T A C T G A C T G C G T A A C T G A C T G G T A C C G T A T A G C A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.48
Offset:3
Orientation:forward strand
Alignment:TGGAGGCACCATT--
---AGGVNCCTTTGT
 A C G T A C T G A C T G C G T A A C T G A C T G G T A C C G T A T A G C A G T C C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T