Information for 1-RMCAGCTGKBNNN (Motif 1)

C T G A T G C A A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T G C A T G T C A T A C G
Reverse Opposite:
A T G C C A G T C G A T T G C A T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T
p-value:1e-241
log p-value:-5.555e+02
Information Content per bp:1.649
Number of Target Sequences with motif466.0
Percentage of Target Sequences with motif55.02%
Number of Background Sequences with motif4390.6
Percentage of Background Sequences with motif9.50%
Average Position of motif in Targets51.1 +/- 19.9bp
Average Position of motif in Background51.2 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-RMCAGCTGKBNNN
NAACAGCTGG----
 A C G T C T G A T G C A A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T G C A T G T C A T A C G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-RMCAGCTGKBNNN
NAHCAGCTGD----
 A C G T C T G A T G C A A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T G C A T G T C A T A C G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.95
Offset:1
Orientation:forward strand
Alignment:RMCAGCTGKBNNN
-ACAGCTGTTN--
 C T G A T G C A A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T G C A T G T C A T A C G
A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-RMCAGCTGKBNNN
CAGCAGCTGN----
 A C G T C T G A T G C A A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T G C A T G T C A T A C G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-RMCAGCTGKBNNN
BAACAGCTGT----
 A C G T C T G A T G C A A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T G C A T G T C A T A C G
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.94
Offset:0
Orientation:forward strand
Alignment:RMCAGCTGKBNNN
AACAGCTG-----
 C T G A T G C A A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T G C A T G T C A T A C G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:RMCAGCTGKBNNN
-GCAGCTGTNN--
 C T G A T G C A A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T G C A T G T C A T A C G
A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:8
Score:0.93
Offset:1
Orientation:forward strand
Alignment:RMCAGCTGKBNNN
-VCAGCTGBNN--
 C T G A T G C A A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T G C A T G T C A T A C G
A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:RMCAGCTGKBNNN
NVCAGCTGBBNN-
 C T G A T G C A A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T G C A T G T C A T A C G
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--RMCAGCTGKBNNN
NNAGCAGCTGCT---
 A C G T A C G T C T G A T G C A A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T G C A T G T C A T A C G
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T