Information for 3-TSCAAGCYRGGRA (Motif 3)

A C G T A T C G G T A C C G T A C G T A A C T G G A T C A G T C T C G A A C T G A C T G C T G A C G T A
Reverse Opposite:
A C G T A G C T A G T C A G T C A G C T C T A G C A T G A G T C A C G T A C G T A C T G A T G C C G T A
p-value:1e-13
log p-value:-3.168e+01
Information Content per bp:1.869
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.7 +/- 17.6bp
Average Position of motif in Background28.2 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TSCAAGCYRGGRA
GGGGCTYGKCTGGGA
 A C G T A C G T A C G T A T C G G T A C C G T A C G T A A C T G G A T C A G T C T C G A A C T G A C T G C T G A C G T A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TSCAAGCYRGGRA
---AAGCTTG---
 A C G T A T C G G T A C C G T A C G T A A C T G G A T C A G T C T C G A A C T G A C T G C T G A C G T A
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TSCAAGCYRGGRA-
NGCTTTCTAGGAAN
 A C G T A T C G G T A C C G T A C G T A A C T G G A T C A G T C T C G A A C T G A C T G C T G A C G T A A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

PB0115.1_Ehf_2/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TSCAAGCYRGGRA------
---AAGATCGGAANTNNNA
 A C G T A T C G G T A C C G T A C G T A A C T G G A T C A G T C T C G A A C T G A C T G C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TSCAAGCYRGGRA--
-ACATGCCCGGGCAT
 A C G T A T C G G T A C C G T A C G T A A C T G G A T C A G T C T C G A A C T G A C T G C T G A C G T A A C G T A C G T
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TSCAAGCYRGGRA
---CAGCC-----
 A C G T A T C G G T A C C G T A C G T A A C T G G A T C A G T C T C G A A C T G A C T G C T G A C G T A
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TSCAAGCYRGGRA
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T A T C G G T A C C G T A C G T A A C T G G A T C A G T C T C G A A C T G A C T G C T G A C G T A
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

BCL6B/MA0731.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TSCAAGCYRGGRA----
TGCTTTCTAGGAATTCA
 A C G T A T C G G T A C C G T A C G T A A C T G G A T C A G T C T C G A A C T G A C T G C T G A C G T A A C G T A C G T A C G T A C G T
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TSCAAGCYRGGRA
---WDNCTGGGCA
 A C G T A T C G G T A C C G T A C G T A A C T G G A T C A G T C T C G A A C T G A C T G C T G A C G T A
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TSCAAGCYRGGRA--
RGSMTBCTGGGAAAT
 A C G T A T C G G T A C C G T A C G T A A C T G G A T C A G T C T C G A A C T G A C T G C T G A C G T A A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T