Information for 1-NMVCAGCTGBKNN (Motif 1)

C T G A G T C A T G C A T G A C C G T A A C T G G T A C C G A T A T C G A C T G C A G T A C G T C G A T
Reverse Opposite:
G C T A G T C A G T C A T G A C T A G C C G T A C A T G T G A C C G A T A C T G A C G T C A G T G A C T
p-value:1e-246
log p-value:-5.670e+02
Information Content per bp:1.572
Number of Target Sequences with motif431.0
Percentage of Target Sequences with motif51.87%
Number of Background Sequences with motif3509.2
Percentage of Background Sequences with motif7.67%
Average Position of motif in Targets53.3 +/- 19.6bp
Average Position of motif in Background49.9 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.97
Offset:2
Orientation:reverse strand
Alignment:NMVCAGCTGBKNN
--HCAGCTGDTN-
 C T G A G T C A T G C A T G A C C G T A A C T G G T A C C G A T A T C G A C T G C A G T A C G T C G A T
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.97
Offset:2
Orientation:forward strand
Alignment:NMVCAGCTGBKNN
--NCAGCTGCTG-
 C T G A G T C A T G C A T G A C C G T A A C T G G T A C C G A T A T C G A C T G C A G T A C G T C G A T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.97
Offset:0
Orientation:forward strand
Alignment:NMVCAGCTGBKNN
NAACAGCTGG---
 C T G A G T C A T G C A T G A C C G T A A C T G G T A C C G A T A T C G A C T G C A G T A C G T C G A T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:NMVCAGCTGBKNN
NAACAGCTGT---
 C T G A G T C A T G C A T G A C C G T A A C T G G T A C C G A T A T C G A C T G C A G T A C G T C G A T
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.96
Offset:0
Orientation:forward strand
Alignment:NMVCAGCTGBKNN
NNACAGCTGC---
 C T G A G T C A T G C A T G A C C G T A A C T G G T A C C G A T A T C G A C T G C A G T A C G T C G A T
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NMVCAGCTGBKNN
-AACAGCTG----
 C T G A G T C A T G C A T G A C C G T A A C T G G T A C C G A T A T C G A C T G C A G T A C G T C G A T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:NMVCAGCTGBKNN
-NVCAGCTGBBNN
 C T G A G T C A T G C A T G A C C G T A A C T G G T A C C G A T A T C G A C T G C A G T A C G T C G A T
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.95
Offset:3
Orientation:reverse strand
Alignment:NMVCAGCTGBKNN
---CAGCTGNT--
 C T G A G T C A T G C A T G A C C G T A A C T G G T A C C G A T A T C G A C T G C A G T A C G T C G A T
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.95
Offset:0
Orientation:forward strand
Alignment:NMVCAGCTGBKNN
BAACAGCTGT---
 C T G A G T C A T G C A T G A C C G T A A C T G G T A C C G A T A T C G A C T G C A G T A C G T C G A T
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.94
Offset:1
Orientation:forward strand
Alignment:NMVCAGCTGBKNN
-AGCAGCTGCTNN
 C T G A G T C A T G C A T G A C C G T A A C T G G T A C C G A T A T C G A C T G C A G T A C G T C G A T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C