p-value: | 1e-6 |
log p-value: | -1.432e+01 |
Information Content per bp: | 1.918 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 3.70% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 55.0 +/- 33.0bp |
Average Position of motif in Background | 58.9 +/- 10.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
POU4F2/MA0683.1/Jaspar
Match Rank: | 1 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GAGTATTTGATGAGAC ATGCATAATTAATGAG-- |
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POU4F3/MA0791.1/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GAGTATTTGATGAGAC ATGCATAATTAATGAG-- |
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HOXC13/MA0907.1/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GAGTATTTGATGAGAC ----NTTTTACGAGN- |
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PH0068.1_Hoxc13/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAGTATTTGATGAGAC-- --NAATTTTACGAGNTNN |
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HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GAGTATTTGATGAGAC -----TTTTATTRGN- |
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PH0048.1_Hoxa13/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAGTATTTGATGAGAC-- --ANATTTTACGAGNNNN |
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HOXC10/MA0905.1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GAGTATTTGATGAGAC ----NTTTTACGAC-- |
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Arid3a/MA0151.1/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GAGTATTTGATGAGAC -----TTTAAT----- |
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Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GAGTATTTGATGAGAC ---TAATTGATTA--- |
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HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GAGTATTTGATGAGAC -----TTTTATKRGG- |
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