Information for 1-ATAATTTCCA (Motif 4)

C T G A A C G T C G T A C G T A A C G T A C G T A C G T A G T C A G T C C G T A
Reverse Opposite:
C G A T A C T G A C T G C G T A C G T A T G C A A C G T A C G T G T C A A G C T
p-value:1e-6
log p-value:-1.608e+01
Information Content per bp:1.901
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif199.5
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets43.1 +/- 22.6bp
Average Position of motif in Background46.2 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:ATAATTTCCA--
--ATTTTCCATT
 C T G A A C G T C G T A C G T A A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:ATAATTTCCA--
--ATTTTCCATT
 C T G A A C G T C G T A C G T A A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ATAATTTCCA--
--ATTTTCCATT
 C T G A A C G T C G T A C G T A A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.74
Offset:2
Orientation:forward strand
Alignment:ATAATTTCCA--
--ATTTTCCATT
 C T G A A C G T C G T A C G T A A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.72
Offset:3
Orientation:forward strand
Alignment:ATAATTTCCA
---TTTTCCA
 C T G A A C G T C G T A C G T A A C G T A C G T A C G T A G T C A G T C C G T A
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ATAATTTCCA
GGGAATTTCC-
 A C G T C T G A A C G T C G T A C G T A A C G T A C G T A C G T A G T C A G T C C G T A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATAATTTCCA----
-TTACTTCCTNGTN
 C T G A A C G T C G T A C G T A A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

PH0022.1_Dlx3/Jaspar

Match Rank:8
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----ATAATTTCCA--
TCGCGATAATTACCGAC
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T C G T A C G T A A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------ATAATTTCCA---
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T C G T A C G T A A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.67
Offset:3
Orientation:forward strand
Alignment:ATAATTTCCA---
---ATTTCCTGTN
 C T G A A C G T C G T A C G T A A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G