Information for 5-CCCGCGGSGG (Motif 11)

A G T C A G T C T G A C A C T G A G T C A T C G A T C G T A G C T C A G A T C G
Reverse Opposite:
A T G C A G T C A T C G A T G C A T G C A C T G T G A C A C T G A C T G A C T G
p-value:1e-2
log p-value:-6.023e+00
Information Content per bp:1.771
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif238.1
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets76.2 +/- 13.9bp
Average Position of motif in Background53.8 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CCCGCGGSGG---
CCCCCCCGGGGGGGT
 A C G T A C G T A G T C A G T C T G A C A C T G A G T C A T C G A T C G T A G C T C A G A T C G A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CCCGCGGSGG---
CCCCCCCGGGGGGGT
 A C G T A C G T A G T C A G T C T G A C A C T G A G T C A T C G A T C G T A G C T C A G A T C G A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCGGSGG--
CCCCCCCGGGGGNN
 A C G T A C G T A G T C A G T C T G A C A C T G A G T C A T C G A T C G T A G C T C A G A T C G A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCCGCGGSGG
NYTTCCCGCC----
 A C G T A C G T A C G T A C G T A G T C A G T C T G A C A C T G A G T C A T C G A T C G T A G C T C A G A T C G
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCGGSGG---
NCNCAGCGGGGGGTC
 A C G T A C G T A G T C A G T C T G A C A C T G A G T C A T C G A T C G T A G C T C A G A T C G A C G T A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCCGCGGSGG
NNTTCCCGCCC---
 A C G T A C G T A C G T A C G T A G T C A G T C T G A C A C T G A G T C A T C G A T C G T A G C T C A G A T C G
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCGGSGG---
NCGCAGCGGGGGGTC
 A C G T A C G T A G T C A G T C T G A C A C T G A G T C A T C G A T C G T A G C T C A G A T C G A C G T A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

PB0204.1_Zfp740_2/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CCCGCGGSGG-
AAATTCCCCCCGGAAGT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C T G A C A C T G A G T C A T C G A T C G T A G C T C A G A T C G A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCGGSGG
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C T G A C A C T G A G T C A T C G A T C G T A G C T C A G A T C G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCCGCGGSGG-
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A C G T A G T C A G T C T G A C A C T G A G T C A T C G A T C G T A G C T C A G A T C G A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A