Information for 1-YTYGARRWKCTMTCAG (Motif 1)

A G T C A C G T A G C T A C T G C G T A C T G A T C G A C G A T A C G T A G T C A C G T G T A C A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A C T G C G T A A C T G G T C A C G T A A G C T A G C T A C G T A G T C T C A G C G T A C T A G
p-value:1e-16
log p-value:-3.899e+01
Information Content per bp:1.829
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif9.26%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 21.6bp
Average Position of motif in Background88.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:YTYGARRWKCTMTCAG
--------GCTGTCAA
 A G T C A C G T A G C T A C T G C G T A C T G A T C G A C G A T A C G T A G T C A C G T G T A C A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.51
Offset:6
Orientation:forward strand
Alignment:YTYGARRWKCTMTCAG-
------AGCCACTCAAG
 A G T C A C G T A G C T A C T G C G T A C T G A T C G A C G A T A C G T A G T C A C G T G T A C A C G T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.51
Offset:3
Orientation:forward strand
Alignment:YTYGARRWKCTMTCAG---
---AAGCACCTGTCAATAT
 A G T C A C G T A G C T A C T G C G T A C T G A T C G A C G A T A C G T A G T C A C G T G T A C A C G T A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PH0170.1_Tgif2/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:YTYGARRWKCTMTCAG---
---AACTAGCTGTCAATAC
 A G T C A C G T A G C T A C T G C G T A C T G A T C G A C G A T A C G T A G T C A C G T G T A C A C G T A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.50
Offset:3
Orientation:forward strand
Alignment:YTYGARRWKCTMTCAG---
---AATTACCTGTCAATAC
 A G T C A C G T A G C T A C T G C G T A C T G A T C G A C G A T A C G T A G T C A C G T G T A C A C G T A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:YTYGARRWKCTMTCAG---
---GAAGATCAATCACTTA
 A G T C A C G T A G C T A C T G C G T A C T G A T C G A C G A T A C G T A G T C A C G T G T A C A C G T A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:YTYGARRWKCTMTCAG-
-------TGGTTTCAGT
 A G T C A C G T A G C T A C T G C G T A C T G A T C G A C G A T A C G T A G T C A C G T G T A C A C G T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:YTYGARRWKCTMTCAG--
----AAAAACCATTAAGG
 A G T C A C G T A G C T A C T G C G T A C T G A T C G A C G A T A C G T A G T C A C G T G T A C A C G T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:YTYGARRWKCTMTCAG---
---AACGAGCTGTCAATAC
 A G T C A C G T A G C T A C T G C G T A C T G A T C G A C G A T A C G T A G T C A C G T G T A C A C G T A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:forward strand
Alignment:YTYGARRWKCTMTCAG-
-------VGCTGWCAVB
 A G T C A C G T A G C T A C T G C G T A C T G A T C G A C G A T A C G T A G T C A C G T G T A C A C G T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C