Information for 4-YCTCYTYTGTGGGGWR (Motif 7)

G A T C A G T C A C G T T G A C G A T C C G A T G A C T A C G T A C T G A C G T A C T G A T C G C A T G A T C G C G A T C T A G
Reverse Opposite:
G A T C C G T A T A G C G T A C T A G C G T A C G T C A T G A C C G T A C T G A C G T A C T A G A C T G C G T A C T A G C T A G
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.659
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif66.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets44.6 +/- 26.8bp
Average Position of motif in Background44.2 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:YCTCYTYTGTGGGGWR
----NNHTGTGGTTWN
 G A T C A G T C A C G T T G A C G A T C C G A T G A C T A C G T A C T G A C G T A C T G A T C G C A T G A T C G C G A T C T A G
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:YCTCYTYTGTGGGGWR
----GTCTGTGGTTT-
 G A T C A G T C A C G T T G A C G A T C C G A T G A C T A C G T A C T G A C G T A C T G A T C G C A T G A T C G C G A T C T A G
A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:YCTCYTYTGTGGGGWR
-----GCTGTGGTTT-
 G A T C A G T C A C G T T G A C G A T C C G A T G A C T A C G T A C T G A C G T A C T G A T C G C A T G A T C G C G A T C T A G
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:YCTCYTYTGTGGGGWR
------CTGTGGTTTN
 G A T C A G T C A C G T T G A C G A T C C G A T G A C T A C G T A C T G A C G T A C T G A T C G C A T G A T C G C G A T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:YCTCYTYTGTGGGGWR
-----NNTGTGGTTT-
 G A T C A G T C A C G T T G A C G A T C C G A T G A C T A C G T A C T G A C G T A C T G A T C G C A T G A T C G C G A T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:YCTCYTYTGTGGGGWR
-----TTTGCGGTTT-
 G A T C A G T C A C G T T G A C G A T C C G A T G A C T A C G T A C T G A C G T A C T G A T C G C A T G A T C G C G A T C T A G
A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:YCTCYTYTGTGGGGWR
---CCWTTGTY-----
 G A T C A G T C A C G T T G A C G A T C C G A T G A C T A C G T A C T G A C G T A C T G A T C G C A T G A T C G C G A T C T A G
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.53
Offset:9
Orientation:forward strand
Alignment:YCTCYTYTGTGGGGWR
---------TGGGGA-
 G A T C A G T C A C G T T G A C G A T C C G A T G A C T A C G T A C T G A C G T A C T G A T C G C A T G A T C G C G A T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:YCTCYTYTGTGGGGWR
---CCTTTGTT-----
 G A T C A G T C A C G T T G A C G A T C C G A T G A C T A C G T A C T G A C G T A C T G A T C G C A T G A T C G C G A T C T A G
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-YCTCYTYTGTGGGGWR
CAATGCATTGTGGGTA-
 A C G T G A T C A G T C A C G T T G A C G A T C C G A T G A C T A C G T A C T G A C G T A C T G A T C G C A T G A T C G C G A T C T A G
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A A C G T