Information for 1-TGCAGTGGGCACA (Motif 2)

A C G T C A T G A G T C C G T A C T A G C G A T A C T G C T A G C T A G A G T C C G T A A G T C G T C A
Reverse Opposite:
A C G T A C T G C G A T A C T G A G T C A G T C A G T C C G T A A G T C A C G T A C T G G T A C G T C A
p-value:1e-12
log p-value:-2.893e+01
Information Content per bp:1.815
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.4 +/- 16.8bp
Average Position of motif in Background59.5 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAGTGGGCACA
NNNANTGCAGTGCNNTT-
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C G T A C T A G C G A T A C T G C T A G C T A G A G T C C G T A A G T C G T C A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCAGTGGGCACA-----
-TACATGTGCACATAAAA
 A C G T C A T G A G T C C G T A C T A G C G A T A C T G C T A G C T A G A G T C C G T A A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCAGTGGGCACA---
NNNNTTGGGCACNNCN
 A C G T C A T G A G T C C G T A C T A G C G A T A C T G C T A G C T A G A G T C C G T A A G T C G T C A A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

MTF1/MA0863.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGTGGGCACA
GTGCCGTGTGCAAA
 A C G T A C G T C A T G A G T C C G T A C T A G C G A T A C T G C T A G C T A G A G T C C G T A A G T C G T C A
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGCAGTGGGCACA
---NGTGGGCAT-
 A C G T C A T G A G T C C G T A C T A G C G A T A C T G C T A G C T A G A G T C C G T A A G T C G T C A
A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGCAGTGGGCACA
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A C G T C A T G A G T C C G T A C T A G C G A T A C T G C T A G C T A G A G T C C G T A A G T C G T C A
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGCAGTGGGCACA-----
-CAGATGTGCACATACGT
 A C G T C A T G A G T C C G T A C T A G C G A T A C T G C T A G C T A G A G T C C G T A A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGCAGTGGGCACA--
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T C A T G A G T C C G T A C T A G C G A T A C T G C T A G C T A G A G T C C G T A A G T C G T C A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGCAGTGGGCACA
--CAAAGGTCAG-
 A C G T C A T G A G T C C G T A C T A G C G A T A C T G C T A G C T A G A G T C C G T A A G T C G T C A
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGCAGTGGGCACA-----
-NNNNTGAGCACTGTNNG
 A C G T C A T G A G T C C G T A C T A G C G A T A C T G C T A G C T A G A G T C C G T A A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G