Information for 7-TCTCTGTCTC (Motif 17)

A G C T A G T C A G C T A G T C A G C T A C T G C A G T A G T C A C G T G A T C
Reverse Opposite:
C T A G C G T A C T A G G T C A T G A C C T G A A C T G C T G A A C T G C T G A
p-value:1e-6
log p-value:-1.520e+01
Information Content per bp:1.779
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.51%
Number of Background Sequences with motif410.7
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets51.6 +/- 23.8bp
Average Position of motif in Background51.1 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCTCTGTCTC
GCTCGGSCTC
 A G C T A G T C A G C T A G T C A G C T A C T G C A G T A G T C A C G T G A T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TCTCTGTCTC
AGTATTCTCGGTTGC
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G C T A G T C A G C T A C T G C A G T A G T C A C G T G A T C
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TCTCTGTCTC
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G C T A G T C A G C T A C T G C A G T A G T C A C G T G A T C
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCTGTCTC
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G C T A G T C A G C T A C T G C A G T A G T C A C G T G A T C
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCTCTGTCTC--
CTGTCTGTCACCT
 A C G T A G C T A G T C A G C T A G T C A G C T A C T G C A G T A G T C A C G T G A T C A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCTCTGTCTC---
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A G C T A G T C A G C T A G T C A G C T A C T G C A G T A G T C A C G T G A T C A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCTCTGTCTC--
TGTCTGDCACCT
 A G C T A G T C A G C T A G T C A G C T A C T G C A G T A G T C A C G T G A T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TCTCTGTCTC
ACTTTCACTTTC--
 A C G T A C G T A C G T A C G T A G C T A G T C A G C T A G T C A G C T A C T G C A G T A G T C A C G T G A T C
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCTCTGTCTC-
---CTGTCTGG
 A G C T A G T C A G C T A G T C A G C T A C T G C A G T A G T C A C G T G A T C A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCTCTGTCTC
AGTTTCAGTTTC
 A C G T A C G T A G C T A G T C A G C T A G T C A G C T A C T G C A G T A G T C A C G T G A T C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C