Information for 4-CVTGAATGACATG (Motif 16)

G T A C T A G C A C G T A C T G C G T A C G T A C A G T C A T G C G T A G T A C C G T A A C G T C A T G
Reverse Opposite:
G T A C C G T A A C G T C A T G C G A T G T A C G T C A C G A T A C G T G T A C C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.619e+01
Information Content per bp:1.771
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif32.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets43.9 +/- 25.5bp
Average Position of motif in Background49.4 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CVTGAATGACATG
-NTGATTGACAGN
 G T A C T A G C A C G T A C T G C G T A C G T A C A G T C A T G C G T A G T A C C G T A A C G T C A T G
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CVTGAATGACATG
-BTGABTGACAGS
 G T A C T A G C A C G T A C T G C G T A C G T A C A G T C A T G C G T A G T A C C G T A A C G T C A T G
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CVTGAATGACATG---
-TTGAATGAAATTCGA
 G T A C T A G C A C G T A C T G C G T A C G T A C A G T C A T G C G T A G T A C C G T A A C G T C A T G A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CVTGAATGACATG
NNTNTCATGAATGT----
 A C G T A C G T A C G T A C G T A C G T G T A C T A G C A C G T A C T G C G T A C G T A C A G T C A T G C G T A G T A C C G T A A C G T C A T G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CVTGAATGACATG-
--TGAGTGACAGSC
 G T A C T A G C A C G T A C T G C G T A C G T A C A G T C A T G C G T A G T A C C G T A A C G T C A T G A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CVTGAATGACATG
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T G T A C T A G C A C G T A C T G C G T A C G T A C A G T C A T G C G T A G T A C C G T A A C G T C A T G
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CVTGAATGACATG
--TCAAGGTCAT-
 G T A C T A G C A C G T A C T G C G T A C G T A C A G T C A T G C G T A G T A C C G T A A C G T C A T G
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CVTGAATGACATG
-TTCAAGGTCAT-
 G T A C T A G C A C G T A C T G C G T A C G T A C A G T C A T G C G T A G T A C C G T A A C G T C A T G
A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CVTGAATGACATG
--TCAAGGTCATA
 G T A C T A G C A C G T A C T G C G T A C G T A C A G T C A T G C G T A G T A C C G T A A C G T C A T G
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CVTGAATGACATG--
----AAGGATATNTN
 G T A C T A G C A C G T A C T G C G T A C G T A C A G T C A T G C G T A G T A C C G T A A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T