Information for 4-AMWTYAACMWSGWTTW (Motif 7)

C G T A G T A C C G T A A C G T A G C T C G T A C G T A A G T C G T C A C G A T A T C G A C T G C G T A A C G T A C G T C G T A
Reverse Opposite:
G C A T G T C A C G T A C G A T A G T C A T G C C G T A A C G T A C T G C G A T A C G T C T G A C G T A C G A T A C T G A C G T
p-value:1e-11
log p-value:-2.601e+01
Information Content per bp:1.806
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.4 +/- 14.4bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AMWTYAACMWSGWTTW----
---AAAACATCGTTTTTAAG
 C G T A G T A C C G T A A C G T A G C T C G T A C G T A A G T C G T C A C G A T A T C G A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PB0185.1_Tcf1_2/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AMWTYAACMWSGWTTW--
----TTGCCCGGATTAGG
 C G T A G T A C C G T A A C G T A G C T C G T A C G T A A G T C G T C A C G A T A T C G A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AMWTYAACMWSGWTTW
GANGTTAACTAGTTTNN
 A C G T C G T A G T A C C G T A A C G T A G C T C G T A C G T A A G T C G T C A C G A T A T C G A C T G C G T A A C G T A C G T C G T A
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AMWTYAACMWSGWTTW
AAATAAACA-------
 C G T A G T A C C G T A A C G T A G C T C G T A C G T A A G T C G T C A C G A T A T C G A C T G C G T A A C G T A C G T C G T A
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:AMWTYAACMWSGWTTW--
--------VRGGATTARN
 C G T A G T A C C G T A A C G T A G C T C G T A C G T A A G T C G T C A C G A T A T C G A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AMWTYAACMWSGWTTW
ATGTAAACADGS----
 C G T A G T A C C G T A A C G T A G C T C G T A C G T A A G T C G T C A C G A T A T C G A C T G C G T A A C G T A C G T C G T A
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AMWTYAACMWSGWTTW
--GTAAACAA------
 C G T A G T A C C G T A A C G T A G C T C G T A C G T A A G T C G T C A C G A T A T C G A C T G C G T A A C G T A C G T C G T A
A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:AMWTYAACMWSGWTTW
--------NGGGATTA
 C G T A G T A C C G T A A C G T A G C T C G T A C G T A A G T C G T C A C G A T A T C G A C T G C G T A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

Sox1/MA0870.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AMWTYAACMWSGWTTW
AACAATAACATTGTT--
 A C G T C G T A G T A C C G T A A C G T A G C T C G T A C G T A A G T C G T C A C G A T A T C G A C T G C G T A A C G T A C G T C G T A
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:AMWTYAACMWSGWTTW-
---------CGGATTAN
 C G T A G T A C C G T A A C G T A G C T C G T A C G T A A G T C G T C A C G A T A T C G A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A