Information for 14-CACNCAMACTCACAGA (Motif 35)

G T A C T C G A A G T C G A C T A T G C C G T A G T C A G C T A A G T C G C A T A T G C C G T A G T A C G T C A A T C G C G T A
Reverse Opposite:
C G A T A T G C A C G T A C T G C G A T A T C G C G T A T A C G C A G T C A G T A C G T A T C G C T G A A C T G A G C T A C T G
p-value:1e-6
log p-value:-1.514e+01
Information Content per bp:1.684
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif143.5
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets53.1 +/- 22.3bp
Average Position of motif in Background49.2 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACNCAMACTCACAGA
TBGCACGCAA---------
 A C G T A C G T A C G T G T A C T C G A A G T C G A C T A T G C C G T A G T C A G C T A A G T C G C A T A T G C C G T A G T A C G T C A A T C G C G T A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACNCAMACTCACAGA
AGCGGCACACACGCAA---
 A C G T A C G T A C G T G T A C T C G A A G T C G A C T A T G C C G T A G T C A G C T A A G T C G C A T A T G C C G T A G T A C G T C A A T C G C G T A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CACNCAMACTCACAGA
CRCCCACGCA------
 G T A C T C G A A G T C G A C T A T G C C G T A G T C A G C T A A G T C G C A T A T G C C G T A G T A C G T C A A T C G C G T A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CACNCAMACTCACAGA
CACGCA----------
 G T A C T C G A A G T C G A C T A T G C C G T A G T C A G C T A A G T C G C A T A T G C C G T A G T A C G T C A A T C G C G T A
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CACNCAMACTCACAGA
AGCCACTCAAG--------
 A C G T A C G T A C G T G T A C T C G A A G T C G A C T A T G C C G T A G T C A G C T A A G T C G C A T A T G C C G T A G T A C G T C A A T C G C G T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CACNCAMACTCACAGA
-GGACACACCCCC---
 G T A C T C G A A G T C G A C T A T G C C G T A G T C A G C T A A G T C G C A T A T G C C G T A G T A C G T C A A T C G C G T A
A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CACNCAMACTCACAGA
YCCGCCCACGCN------
 A C G T A C G T G T A C T C G A A G T C G A C T A T G C C G T A G T C A G C T A A G T C G C A T A T G C C G T A G T A C G T C A A T C G C G T A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CACNCAMACTCACAGA
CTACGCCCACGCACT--
 A C G T G T A C T C G A A G T C G A C T A T G C C G T A G T C A G C T A A G T C G C A T A T G C C G T A G T A C G T C A A T C G C G T A
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CACNCAMACTCACAGA-
------AAACCACAGAN
 G T A C T C G A A G T C G A C T A T G C C G T A G T C A G C T A A G T C G C A T A T G C C G T A G T A C G T C A A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CACNCAMACTCACAGA
-GGCCACACCCAN---
 G T A C T C G A A G T C G A C T A T G C C G T A G T C A G C T A A G T C G C A T A T G C C G T A G T A C G T C A A T C G C G T A
A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T