Information for 10-TTATTCATTC (Motif 33)

A C G T A C G T C G T A A C G T A G C T A G T C C G T A C G A T A C G T T A G C
Reverse Opposite:
A C T G G T C A G C T A A C G T A C T G C T G A C G T A A C G T C G T A C G T A
p-value:1e-7
log p-value:-1.638e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.2 +/- 24.8bp
Average Position of motif in Background55.4 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TTATTCATTC
GAATATTCAT--
 A C G T A C G T A C G T A C G T C G T A A C G T A G C T A G T C C G T A C G A T A C G T T A G C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TTATTCATTC
GHATATKCAT--
 A C G T A C G T A C G T A C G T C G T A A C G T A G C T A G T C C G T A C G A T A C G T T A G C
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TTATTCATTC-----
NNCATTCATTCATNNN
 A C G T A C G T A C G T C G T A A C G T A G C T A G T C C G T A C G A T A C G T T A G C A C G T A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTATTCATTC
TGAATTATGCAT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A G T C C G T A C G A T A C G T T A G C
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TTATTCATTC---
AATCAATTCAATAATT
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A G T C C G T A C G A T A C G T T A G C A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTATTCATTC---
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A G T C C G T A C G A T A C G T T A G C A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTATTCATTC----
ACATTCATGACACG
 A C G T A C G T C G T A A C G T A G C T A G T C C G T A C G A T A C G T T A G C A C G T A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTATTCATTC
NNATGASTCATH-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A G T C C G T A C G A T A C G T T A G C
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TTATTCATTC
TCATGAATWATTCAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A G T C C G T A C G A T A C G T T A G C
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:10
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TTATTCATTC
CATTAATTATTCAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A G T C C G T A C G A T A C G T T A G C
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T A C G T A C G T