Information for 8-TTAGAATACA (Motif 29)

A C G T A C G T G T C A A C T G C G T A C G T A A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A A C G T A C G T A G T C A C G T C G T A C G T A
p-value:1e-7
log p-value:-1.740e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 26.4bp
Average Position of motif in Background85.4 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTAGAATACA----
ATTTGCATACAATGG
 A C G T A C G T A C G T G T C A A C T G C G T A C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTAGAATACA-
NNNTTTNTAATACNG
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C T G C G T A C G T A A C G T C G T A A G T C C G T A A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTAGAATACA
ATTTGAATT--
 A C G T A C G T A C G T G T C A A C T G C G T A C G T A A C G T C G T A A G T C C G T A
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTAGAATACA-
TAAGATTATAATACGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C T G C G T A C G T A A C G T C G T A A G T C C G T A A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGAATACA-
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C T G C G T A C G T A A C G T C G T A A G T C C G T A A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGAATACA-
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C T G C G T A C G T A A C G T C G T A A G T C C G T A A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTAGAATACA
ATTTGCATA--
 A C G T A C G T A C G T G T C A A C T G C G T A C G T A A C G T C G T A A G T C C G T A
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTAGAATACA
ATTTGCATA--
 A C G T A C G T A C G T G T C A A C T G C G T A C G T A A C G T C G T A A G T C C G T A
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGAATACA-
TNTAATTTGCATANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C T G C G T A C G T A A C G T C G T A A G T C C G T A A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTAGAATACA--
-TCCAATCCACA
 A C G T A C G T G T C A A C T G C G T A C G T A A C G T C G T A A G T C C G T A A C G T A C G T
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A