Information for 7-CTCRCWAAAC (Motif 26)

A T G C A C G T G A T C C T A G A T G C C G T A C T G A G T C A C G T A G T A C
Reverse Opposite:
A C T G A C G T A C G T A G C T G C A T A T C G G A T C C T A G C G T A A T C G
p-value:1e-7
log p-value:-1.822e+01
Information Content per bp:1.730
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.10%
Number of Background Sequences with motif343.7
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets52.9 +/- 25.9bp
Average Position of motif in Background50.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTCRCWAAAC
GCTCGTAAAAA
 A C G T A T G C A C G T G A T C C T A G A T G C C G T A C T G A G T C A C G T A G T A C
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCRCWAAAC
VTTRCATAAY
 A T G C A C G T G A T C C T A G A T G C C G T A C T G A G T C A C G T A G T A C
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTCRCWAAAC----
CGTATCGAAACCAAA
 A C G T A T G C A C G T G A T C C T A G A T G C C G T A C T G A G T C A C G T A G T A C A C G T A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

GFX(?)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTCRCWAAAC
ATTCTCGCGAGA-
 A C G T A C G T A C G T A T G C A C G T G A T C C T A G A T G C C G T A C T G A G T C A C G T A G T A C
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T

CEBPE/MA0837.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCRCWAAAC
ATTGCGCAAT
 A T G C A C G T G A T C C T A G A T G C C G T A C T G A G T C A C G T A G T A C
T C G A G A C T C A G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCRCWAAAC-
ATTGCACAATA
 A T G C A C G T G A T C C T A G A T G C C G T A C T G A G T C A C G T A G T A C A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

CEBPB/MA0466.2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCRCWAAAC
ATTGCGCAAT
 A T G C A C G T G A T C C T A G A T G C C G T A C T G A G T C A C G T A G T A C
T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCRCWAAAC-
-TTGCAACATN
 A T G C A C G T G A T C C T A G A T G C C G T A C T G A G T C A C G T A G T A C A C G T
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

PH0068.1_Hoxc13/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTCRCWAAAC--
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A T G C A C G T G A T C C T A G A T G C C G T A C T G A G T C A C G T A G T A C A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HLF/MA0043.2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCRCWAAAC-
CATTACGTAACC
 A C G T A T G C A C G T G A T C C T A G A T G C C G T A C T G A G T C A C G T A G T A C A C G T
G A T C T C G A G C A T A C G T C T G A A G T C T C A G G A C T G T C A C G T A A G T C G T A C