Information for 5-ATTTAGGAAG (Motif 18)

G T C A A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G
Reverse Opposite:
A G T C A G C T A C G T A G T C G T A C G C A T G T C A G T C A C G T A C A G T
p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.788
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif223.0
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets34.8 +/- 26.6bp
Average Position of motif in Background51.5 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0048.1_Hoxa13/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATTTAGGAAG---
ANATTTTACGAGNNNN
 A C G T A C G T A C G T G T C A A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATTTAGGAAG---
NAATTTTACGAGNTNN
 A C G T A C G T A C G T G T C A A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATTTAGGAAG
NTTTTACGAGN
 A C G T G T C A A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

HOXC10/MA0905.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATTTAGGAAG
NTTTTACGAC-
 A C G T G T C A A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATTTAGGAAG
NTTTTACGAC-
 A C G T G T C A A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATTTAGGAAG
NGCTTTCTAGGAAN
 A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:ATTTAGGAAG-
-----NGAAGC
 G T C A A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PB0162.1_Sfpi1_2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATTTAGGAAG-
CAAATTCCGGAACC
 A C G T A C G T A C G T G T C A A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G A C G T
G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTTAGGAAG---
ANNTTTTACGACNTNN
 A C G T A C G T A C G T G T C A A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0077.1_Hoxd12/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATTTAGGAAG---
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G