Information for 1-CCGTTGCGAA (Motif 12)

A G T C A T G C A C T G A C G T A C G T A C T G G T A C C T A G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C T G G T A C G T C A C G T A A G T C A T C G A C T G
p-value:1e-10
log p-value:-2.470e+01
Information Content per bp:1.879
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.3 +/- 23.2bp
Average Position of motif in Background65.4 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCGTTGCGAA----
NCCGTTGCTANGNGN
 A C G T A G T C A T G C A C T G A C G T A C G T A C T G G T A C C T A G C G T A C G T A A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCGTTGCGAA----
NNCGTTGCTATGGNN
 A C G T A G T C A T G C A C T G A C G T A C G T A C T G G T A C C T A G C G T A C G T A A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCGTTGCGAA--------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A C T G A C G T A C G T A C T G G T A C C T A G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCGTTGCGAA
BRRCVGTTDN---
 A C G T A C G T A C G T A G T C A T G C A C T G A C G T A C G T A C T G G T A C C T A G C G T A C G T A
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T

CEBPB/MA0466.2/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCGTTGCGAA--
--ATTGCGCAAT
 A G T C A T G C A C T G A C G T A C G T A C T G G T A C C T A G C G T A C G T A A C G T A C G T
A C G T A C G T T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

CEBPE/MA0837.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCGTTGCGAA--
--ATTGCGCAAT
 A G T C A T G C A C T G A C G T A C G T A C T G G T A C C T A G C G T A C G T A A C G T A C G T
A C G T A C G T T C G A C G A T C A G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

CEBPD/MA0836.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCGTTGCGAA--
--ATTGCGCAAT
 A G T C A T G C A C T G A C G T A C G T A C T G G T A C C T A G C G T A C G T A A C G T A C G T
A C G T A C G T T C G A A C G T C A G T C A T G A G T C C T A G G A T C G T C A G T C A A G C T

CEBPG/MA0838.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCGTTGCGAA--
--ATTGCGCAAT
 A G T C A T G C A C T G A C G T A C G T A C T G G T A C C T A G C G T A C G T A A C G T A C G T
A C G T A C G T T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCGTTGCGAA--
--GTTGCGCAAT
 A G T C A T G C A C T G A C G T A C G T A C T G G T A C C T A G C G T A C G T A A C G T A C G T
A C G T A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCGTTGCGAA
GGCVGTTR----
 A C G T A C G T A G T C A T G C A C T G A C G T A C G T A C T G G T A C C T A G C G T A C G T A
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T