Information for 3-TGTAGAGGTTTTG (Motif 3)

A C G T A C T G A G C T G T C A A C T G C T G A A C T G A C T G A G C T A C G T C G A T C A G T A C T G
Reverse Opposite:
A G T C G C T A C G T A G T C A C T G A G T A C A G T C A G C T A G T C A C G T T C G A A G T C C G T A
p-value:1e-13
log p-value:-3.138e+01
Information Content per bp:1.816
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.7 +/- 26.8bp
Average Position of motif in Background53.9 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGTAGAGGTTTTG
TGCTGTGATTT--
 A C G T A C T G A G C T G T C A A C T G C T G A A C T G A C T G A G C T A C G T C G A T C A G T A C T G
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGTAGAGGTTTTG
--AAGAGGATTAG
 A C G T A C T G A G C T G T C A A C T G C T G A A C T G A C T G A G C T A C G T C G A T C A G T A C T G
A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGTAGAGGTTTTG----
-GCGGAGGTGTCGCCTC
 A C G T A C T G A G C T G T C A A C T G C T G A A C T G A C T G A G C T A C G T C G A T C A G T A C T G A C G T A C G T A C G T A C G T
A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGTAGAGGTTTTG
NNNANTGCAGTGCNNTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T G T C A A C T G C T G A A C T G A C T G A G C T A C G T C G A T C A G T A C T G
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TGTAGAGGTTTTG
AATTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T G T C A A C T G C T G A A C T G A C T G A G C T A C G T C G A T C A G T A C T G
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGTAGAGGTTTTG
-NNTGTGGTTT--
 A C G T A C T G A G C T G T C A A C T G C T G A A C T G A C T G A G C T A C G T C G A T C A G T A C T G
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGTAGAGGTTTTG
-GCAGTGATTT--
 A C G T A C T G A G C T G T C A A C T G C T G A A C T G A C T G A G C T A C G T C G A T C A G T A C T G
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGTAGAGGTTTTG
BTBRAGTGSN----
 A C G T A C G T A C T G A G C T G T C A A C T G C T G A A C T G A C T G A G C T A C G T C G A T C A G T A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGTAGAGGTTTTG
--TTGCGGTTT--
 A C G T A C T G A G C T G T C A A C T G C T G A A C T G A C T G A G C T A C G T C G A T C A G T A C T G
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGTAGAGGTTTTG
TTGAGTGSTT---
 A C G T A C T G A G C T G T C A A C T G C T G A A C T G A C T G A G C T A C G T C G A T C A G T A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T