Information for 2-CCCCGGGGCC (Motif 29)

A T G C A T G C A T G C T A G C T A C G C T A G A C T G T A C G G A T C A G T C
Reverse Opposite:
T C A G C T A G A T G C T G A C G A T C A T G C A T C G T A C G T A C G T A C G
p-value:1e-7
log p-value:-1.785e+01
Information Content per bp:1.645
Number of Target Sequences with motif143.0
Percentage of Target Sequences with motif20.14%
Number of Background Sequences with motif6281.0
Percentage of Background Sequences with motif12.71%
Average Position of motif in Targets50.5 +/- 28.0bp
Average Position of motif in Background49.6 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCCCGGGGCC
TGCCCCCGGGCA
 A C G T A C G T A T G C A T G C A T G C T A G C T A C G C T A G A C T G T A C G G A T C A G T C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CCCCGGGGCC
TCCCCTGGGGAC
 A C G T A C G T A T G C A T G C A T G C T A G C T A C G C T A G A C T G T A C G G A T C A G T C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

TFAP2B/MA0811.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CCCCGGGGCC
TGCCCCAGGGCA
 A C G T A C G T A T G C A T G C A T G C T A G C T A C G C T A G A C T G T A C G G A T C A G T C
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CCCCGGGGCC
TGCCCCAGGGCA
 A C G T A C G T A T G C A T G C A T G C T A G C T A C G C T A G A C T G T A C G G A T C A G T C
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CCCCGGGGCC-
ACCCCCCCGGGGGGN
 A C G T A C G T A C G T A C G T A T G C A T G C A T G C T A G C T A C G C T A G A C T G T A C G G A T C A G T C A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CCCCGGGGCC-
NCCCCCCCGGGGGGN
 A C G T A C G T A C G T A C G T A T G C A T G C A T G C T A G C T A C G C T A G A C T G T A C G G A T C A G T C A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGGGGCC-
TCCCNNGGGACN
 A C G T A T G C A T G C A T G C T A G C T A C G C T A G A C T G T A C G G A T C A G T C A C G T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCCCGGGGCC-
CCCCCCCGGGGGNN
 A C G T A C G T A C G T A T G C A T G C A T G C T A G C T A C G C T A G A C T G T A C G G A T C A G T C A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCCCGGGGCC--
SCCTSAGGSCAW
 A T G C A T G C A T G C T A G C T A C G C T A G A C T G T A C G G A T C A G T C A C G T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCCCGGGGCC-
TTGCCCTAGGGCAT
 A C G T A C G T A C G T A T G C A T G C A T G C T A G C T A C G C T A G A C T G T A C G G A T C A G T C A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T