Information for 8-AAACCTGCTCTTAAAT (Motif 14)

C G T A C G T A G T C A G T A C A G T C A C G T A C T G G T A C C G A T A T G C A G C T A C G T C G T A C G T A C G T A C A G T
Reverse Opposite:
G C T A A C G T C G A T C G A T C G T A C T G A A T C G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
p-value:1e-11
log p-value:-2.603e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 27.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAACCTGCTCTTAAAT---
---AAAGCTCGTAAAATTT
 C G T A C G T A G T C A G T A C A G T C A C G T A C T G G T A C C G A T A T G C A G C T A C G T C G T A C G T A C G T A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AAACCTGCTCTTAAAT-
------GCTCGTAAAAA
 C G T A C G T A G T C A G T A C A G T C A C G T A C T G G T A C C G A T A T G C A G C T A C G T C G T A C G T A C G T A C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AAACCTGCTCTTAAAT---
---AAACCTCGTAAAATTT
 C G T A C G T A G T C A G T A C A G T C A C G T A C T G G T A C C G A T A T G C A G C T A C G T C G T A C G T A C G T A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAACCTGCTCTTAAAT
NCACCTGTN-------
 C G T A C G T A G T C A G T A C A G T C A C G T A C T G G T A C C G A T A T G C A G C T A C G T C G T A C G T A C G T A C A G T
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AAACCTGCTCTTAAAT
SNGCACCTGCHS------
 A C G T A C G T C G T A C G T A G T C A G T A C A G T C A C G T A C T G G T A C C G A T A T G C A G C T A C G T C G T A C G T A C G T A C A G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:AAACCTGCTCTTAAAT--
------GGTCGTAAAATT
 C G T A C G T A G T C A G T A C A G T C A C G T A C T G G T A C C G A T A T G C A G C T A C G T C G T A C G T A C G T A C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

TFCP2/MA0145.3/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAACCTGCTCTTAAAT
AAACCGGTTT------
 C G T A C G T A G T C A G T A C A G T C A C G T A C T G G T A C C G A T A T G C A G C T A C G T C G T A C G T A C G T A C A G T
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AAACCTGCTCTTAAAT-
------GGTCGTAAAAT
 C G T A C G T A G T C A G T A C A G T C A C G T A C T G G T A C C G A T A T G C A G C T A C G T C G T A C G T A C G T A C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

ISL2/MA0914.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AAACCTGCTCTTAAAT
------GCACTTAA--
 C G T A C G T A G T C A G T A C A G T C A C G T A C T G G T A C C G A T A T G C A G C T A C G T C G T A C G T A C G T A C A G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AAACCTGCTCTTAAAT
NAAACCGGTTTT-----
 A C G T C G T A C G T A G T C A G T A C A G T C A C G T A C T G G T A C C G A T A T G C A G C T A C G T C G T A C G T A C G T A C A G T
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T A C G T A C G T A C G T