Information for 4-ACCTACTGGGTGC (Motif 5)

C G T A A G T C A G T C A C G T T C G A G T A C G C A T A C T G A C T G A C T G C G A T C A T G A T G C
Reverse Opposite:
A T C G G A T C C G T A G T A C G T A C G T A C C G T A A C T G A C G T C G T A A C T G A C T G A C G T
p-value:1e-13
log p-value:-3.009e+01
Information Content per bp:1.807
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.9 +/- 26.6bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACCTACTGGGTGC
TNTCCTGCTGTGNNG
 A C G T A C G T C G T A A G T C A G T C A C G T T C G A G T A C G C A T A C T G A C T G A C T G C G A T C A T G A T G C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACCTACTGGGTGC
TCNCCTGCTGNGNNN
 A C G T A C G T C G T A A G T C A G T C A C G T T C G A G T A C G C A T A C T G A C T G A C T G C G A T C A T G A T G C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACCTACTGGGTGC
CCCCCTGCTGTG---
 A C G T A C G T C G T A A G T C A G T C A C G T T C G A G T A C G C A T A C T G A C T G A C T G C G A T C A T G A T G C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ACCTACTGGGTGC
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C G T T C G A G T A C G C A T A C T G A C T G A C T G C G A T C A T G A T G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACCTACTGGGTGC
-CCTGCTGAGH--
 C G T A A G T C A G T C A C G T T C G A G T A C G C A T A C T G A C T G A C T G C G A T C A T G A T G C
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACCTACTGGGTGC
NNTCCTGCTGTGNNN
 A C G T A C G T C G T A A G T C A G T C A C G T T C G A G T A C G C A T A C T G A C T G A C T G C G A T C A T G A T G C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACCTACTGGGTGC
SNGCACCTGCHS-----
 A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C G T T C G A G T A C G C A T A C T G A C T G A C T G C G A T C A T G A T G C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACCTACTGGGTGC
NCACCTGTN------
 A C G T A C G T C G T A A G T C A G T C A C G T T C G A G T A C G C A T A C T G A C T G A C T G C G A T C A T G A T G C
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACCTACTGGGTGC
NNCACCTGNN------
 A C G T A C G T A C G T C G T A A G T C A G T C A C G T T C G A G T A C G C A T A C T G A C T G A C T G C G A T C A T G A T G C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----ACCTACTGGGTGC
RYHYACCTGB-------
 A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C G T T C G A G T A C G C A T A C T G A C T G A C T G C G A T C A T G A T G C
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T