Information for 3-ACTCTTTAGCCCA (Motif 4)

G T C A G T A C G A C T G T A C A C G T A C G T A C G T T C G A A C T G G A T C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G T C A G C A T G A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C T G A C G T
p-value:1e-13
log p-value:-3.009e+01
Information Content per bp:1.818
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.1 +/- 22.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0058.1_Hoxb3/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ACTCTTTAGCCCA
TNNNACTAATTAGNTCA
 A C G T A C G T A C G T A C G T G T C A G T A C G A C T G T A C A C G T A C G T A C G T T C G A A C T G G A T C A G T C A G T C C G T A
G C A T G A T C A G T C G T C A T C G A A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A T G C A C G T A G T C C G T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACTCTTTAGCCCA
TGACCTTTGCCCCA
 A C G T G T C A G T A C G A C T G T A C A C G T A C G T A C G T T C G A A C T G G A T C A G T C A G T C C G T A
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

PH0081.1_Pdx1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACTCTTTAGCCCA-
AAGGTAATTAGCTCAT
 A C G T A C G T G T C A G T A C G A C T G T A C A C G T A C G T A C G T T C G A A C T G G A T C A G T C A G T C C G T A A C G T
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ACTCTTTAGCCCA
NNGTANTGTTTTNC---
 A C G T A C G T A C G T A C G T G T C A G T A C G A C T G T A C A C G T A C G T A C G T T C G A A C T G G A T C A G T C A G T C C G T A
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACTCTTTAGCCCA-
TGACCTTTGCCCTAN
 A C G T G T C A G T A C G A C T G T A C A C G T A C G T A C G T T C G A A C T G G A T C A G T C A G T C C G T A A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PH0027.1_Emx2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----ACTCTTTAGCCCA
NNCCACTAATTAGNNNT
 A C G T A C G T A C G T A C G T G T C A G T A C G A C T G T A C A C G T A C G T A C G T T C G A A C T G G A T C A G T C A G T C C G T A
T C A G C A G T A T G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G A T C G C G A T

PH0031.1_Evx1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----ACTCTTTAGCCCA
NNNCACTAATTAGTNNT
 A C G T A C G T A C G T A C G T G T C A G T A C G A C T G T A C A C G T A C G T A C G T T C G A A C T G G A T C A G T C A G T C C G T A
A C T G G C A T A T G C T A G C T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T C A G T A G T C C G A T

PH0131.1_Pax4/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ACTCTTTAGCCCA-
TGAACTAATTAGCCCAC
 A C G T A C G T A C G T G T C A G T A C G A C T G T A C A C G T A C G T A C G T T C G A A C T G G A T C A G T C A G T C C G T A A C G T
G C A T T A C G T C G A C G T A A G T C C A G T C G T A C T G A A G C T G A C T G T C A C T A G G A T C A G T C T A G C C T G A G T A C

PH0036.1_Gsx2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACTCTTTAGCCCA-
AGGTTAATTAGCTGAT
 A C G T A C G T G T C A G T A C G A C T G T A C A C G T A C G T A C G T T C G A A C T G G A T C A G T C A G T C C G T A A C G T
T C G A T A C G C T A G A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G G A T C A G C T A T C G C T G A C A G T

BARHL2/MA0635.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ACTCTTTAGCCCA
ANCGTTTANN---
 G T C A G T A C G A C T G T A C A C G T A C G T A C G T T C G A A C T G G A T C A G T C A G T C C G T A
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T A C G T