Information for 1-CCCCTGCCCTCCAGCT (Motif 3)

A G T C A G T C G T A C A G T C A C G T C T A G A G T C A G T C A T G C A C G T G T A C T A G C C G T A A T C G A G T C A G C T
Reverse Opposite:
C T G A T C A G A T G C C G A T A C T G A C T G G T C A A T C G C T A G A C T G A G T C T C G A C T A G A C T G A C T G C T A G
p-value:1e-14
log p-value:-3.260e+01
Information Content per bp:1.705
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets65.4 +/- 16.8bp
Average Position of motif in Background58.8 +/- 1.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCCCTGCCCTCCAGCT
---CTGCCCGCA----
 A G T C A G T C G T A C A G T C A C G T C T A G A G T C A G T C A T G C A C G T G T A C T A G C C G T A A T C G A G T C A G C T
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTGCCCTCCAGCT
TGACCTTTGCCCTA-----
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C A C G T C T A G A G T C A G T C A T G C A C G T G T A C T A G C C G T A A T C G A G T C A G C T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCCCTGCCCTCCAGCT
----NSCACTYVAV--
 A G T C A G T C G T A C A G T C A C G T C T A G A G T C A G T C A T G C A C G T G T A C T A G C C G T A A T C G A G T C A G C T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTGCCCTCCAGCT
TGACCTTTGCCCTAN----
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C A C G T C T A G A G T C A G T C A T G C A C G T G T A C T A G C C G T A A T C G A G T C A G C T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCCCTGCCCTCCAGCT
AATCGCACTGCATTCCG---
 A C G T A C G T A C G T A C G T A G T C A G T C G T A C A G T C A C G T C T A G A G T C A G T C A T G C A C G T G T A C T A G C C G T A A T C G A G T C A G C T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGCCCTCCAGCT
TCGACCCCGCCCCTAT---
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C A C G T C T A G A G T C A G T C A T G C A C G T G T A C T A G C C G T A A T C G A G T C A G C T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCCCTGCCCTCCAGCT
GCCCCGCCCC------
 A G T C A G T C G T A C A G T C A C G T C T A G A G T C A G T C A T G C A C G T G T A C T A G C C G T A A T C G A G T C A G C T
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTGCCCTCCAGCT
TGACCTCTGACCCCN----
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C A C G T C T A G A G T C A G T C A T G C A C G T G T A C T A G C C G T A A T C G A G T C A G C T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCCCTGCCCTCCAGCT
KGCCCTTCCCCA------
 A C G T A C G T A G T C A G T C G T A C A G T C A C G T C T A G A G T C A G T C A T G C A C G T G T A C T A G C C G T A A T C G A G T C A G C T
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCCCTGCCCTCCAGCT
-CCCCCCCC-------
 A G T C A G T C G T A C A G T C A C G T C T A G A G T C A G T C A T G C A C G T G T A C T A G C C G T A A T C G A G T C A G C T
A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T