Information for 5-CTGRGGCACRSAGWAK (Motif 27)

A G T C A G C T C T A G C T G A A C T G A C T G A G T C C G T A A G T C C T G A A T C G C G T A A C T G C G T A C T G A A C T G
Reverse Opposite:
G T A C A G C T G C A T A G T C C G A T A T G C A G C T C T A G A C G T A C T G A G T C A G T C A G C T A G T C C T G A A C T G
p-value:1e-9
log p-value:-2.120e+01
Information Content per bp:1.788
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.8 +/- 16.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTGRGGCACRSAGWAK
AGCCTCAGGCA--------
 A C G T A C G T A C G T A G T C A G C T C T A G C T G A A C T G A C T G A G T C C G T A A G T C C T G A A T C G C G T A A C T G C G T A C T G A A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTGRGGCACRSAGWAK
AGCCTCAGGCA--------
 A C G T A C G T A C G T A G T C A G C T C T A G C T G A A C T G A C T G A G T C C G T A A G T C C T G A A T C G C G T A A C T G C G T A C T G A A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGRGGCACRSAGWAK
NNNNTTGGGCACNNCN---
 A C G T A C G T A C G T A G T C A G C T C T A G C T G A A C T G A C T G A G T C C G T A A G T C C T G A A T C G C G T A A C T G C G T A C T G A A C T G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGRGGCACRSAGWAK
NGCCTGAGGCN--------
 A C G T A C G T A C G T A G T C A G C T C T A G C T G A A C T G A C T G A G T C C G T A A G T C C T G A A T C G C G T A A C T G C G T A C T G A A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CTGRGGCACRSAGWAK
ATTGCCTGAGGCAAT------
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C T A G C T G A A C T G A C T G A G T C C G T A A G T C C T G A A T C G C G T A A C T G C G T A C T G A A C T G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTGRGGCACRSAGWAK-
-CGAAGCACACAAAATA
 A G T C A G C T C T A G C T G A A C T G A C T G A G T C C G T A A G T C C T G A A T C G C G T A A C T G C G T A C T G A A C T G A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTGRGGCACRSAGWAK
ATGCCCTGAGGC---------
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C T A G C T G A A C T G A C T G A G T C C G T A A G T C C T G A A T C G C G T A A C T G C G T A C T G A A C T G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTGRGGCACRSAGWAK
TGCTGAGTCATNNTG---
 A C G T A C G T A G T C A G C T C T A G C T G A A C T G A C T G A G T C C G T A A G T C C T G A A T C G C G T A A C T G C G T A C T G A A C T G
G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CTGRGGCACRSAGWAK
WTGSCCTSAGGS---------
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C T A G C T G A A C T G A C T G A G T C C G T A A G T C C T G A A T C G C G T A A C T G C G T A C T G A A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGRGGCACRSAGWAK
NGTGGGCAT-------
 A G T C A G C T C T A G C T G A A C T G A C T G A G T C C G T A A G T C C T G A A T C G C G T A A C T G C G T A C T G A A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T