Information for 6-GGGCGGTCTAGRC (Motif 10)

A C T G A C T G C T A G A G T C C T A G C T A G A C G T A T G C G A C T C T G A A C T G C T G A A G T C
Reverse Opposite:
A C T G A G C T G T A C A G C T C T G A A T C G G T C A A G T C G A T C C T A G A G T C G T A C A G T C
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.745
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.6 +/- 27.4bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGTCTAGRC
CGTGGGTGGTCC----
 A C G T A C G T A C G T A C T G A C T G C T A G A G T C C T A G C T A G A C G T A T G C G A C T C T G A A C T G C T G A A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GGGCGGTCTAGRC-
----TGTCTAGACG
 A C T G A C T G C T A G A G T C C T A G C T A G A C G T A T G C G A C T C T G A A C T G C T G A A G T C A C G T
A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGGTCTAGRC
NTNTGGGGGGTCNNNA-
 A C G T A C G T A C G T A C G T A C T G A C T G C T A G A G T C C T A G C T A G A C G T A T G C G A C T C T G A A C T G C T G A A G T C
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGTCTAGRC-
AAGGKGRCGCAGGCA
 A C G T A C T G A C T G C T A G A G T C C T A G C T A G A C G T A T G C G A C T C T G A A C T G C T G A A G T C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGTCTAGRC
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T A C T G A C T G C T A G A G T C C T A G C T A G A C G T A T G C G A C T C T G A A C T G C T G A A G T C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GGGCGGTCTAGRC
NNTNAGGGGCGGNNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G A G T C C T A G C T A G A C G T A T G C G A C T C T G A A C T G C T G A A G T C
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GGGCGGTCTAGRC
NNTNNGGGGCGGNGNGN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G A G T C C T A G C T A G A C G T A T G C G A C T C T G A A C T G C T G A A G T C
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGGTCTAGRC
NNAGGGGCGGGGTNNA-
 A C G T A C G T A C G T A C G T A C T G A C T G C T A G A G T C C T A G C T A G A C G T A T G C G A C T C T G A A C T G C T G A A G T C
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGGTCTAGRC
NNVDGGGYGGGGCYN--
 A C G T A C G T A C G T A C G T A C T G A C T G C T A G A G T C C T A G C T A G A C G T A T G C G A C T C T G A A C T G C T G A A G T C
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGTCTAGRC
RGKGGGCGGAGC----
 A C G T A C G T A C G T A C T G A C T G C T A G A G T C C T A G C T A G A C G T A T G C G A C T C T G A A C T G C T G A A G T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T