Information for 4-GGACAGTTVC (Motif 3)

C T A G T A C G C G T A G T A C C G T A A C T G G A C T A C G T T A G C A G T C
Reverse Opposite:
C T A G A T C G T G C A C T G A T G A C C G A T A C T G G C A T A T G C A G T C
p-value:1e-20
log p-value:-4.825e+01
Information Content per bp:1.597
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif70.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets46.1 +/- 21.4bp
Average Position of motif in Background51.5 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGACAGTTVC-
NGNGACAGCTGCN
 A C G T A C G T C T A G T A C G C G T A G T A C C G T A A C T G G A C T A C G T T A G C A G T C A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Tcf12/MA0521.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGACAGTTVC--
-AACAGCTGCAG
 C T A G T A C G C G T A G T A C C G T A A C T G G A C T A C G T T A G C A G T C A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

PB0047.1_Myf6_1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GGACAGTTVC---
GAAGAACAGGTGTCCG
 A C G T A C G T A C G T C T A G T A C G C G T A G T A C C G T A A C T G G A C T A C G T T A G C A G T C A C G T A C G T A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GGACAGTTVC--
-GACAGCTGCAG
 C T A G T A C G C G T A G T A C C G T A A C T G G A C T A C G T T A G C A G T C A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGACAGTTVC
NNACAGCTGC
 C T A G T A C G C G T A G T A C C G T A A C T G G A C T A C G T T A G C A G T C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGACAGTTVC
NAACAGCTGT
 C T A G T A C G C G T A G T A C C G T A A C T G G A C T A C G T T A G C A G T C
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGACAGTTVC
CCAGGAACAG----
 A C G T A C G T A C G T A C G T C T A G T A C G C G T A G T A C C G T A A C T G G A C T A C G T T A G C A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGACAGTTVC
BAACAGCTGT
 C T A G T A C G C G T A G T A C C G T A A C T G G A C T A C G T T A G C A G T C
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGACAGTTVC
NNVCAGCTGB
 C T A G T A C G C G T A G T A C C G T A A C T G G A C T A C G T T A G C A G T C
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGACAGTTVC
-AACAGCTG-
 C T A G T A C G C G T A G T A C C G T A A C T G G A C T A C G T T A G C A G T C
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T