Information for 13-GTRKCCTGCY (Motif 21)

C T A G A C G T C T A G A C T G A G T C A G T C A C G T A C T G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C C G T A A C T G A C T G G T A C A G T C C G T A A G T C
p-value:1e-7
log p-value:-1.780e+01
Information Content per bp:1.853
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif129.9
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets45.9 +/- 20.3bp
Average Position of motif in Background54.7 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTRKCCTGCY------
-TNTCCTGCTGTGNNG
 C T A G A C G T C T A G A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTRKCCTGCY
ATTTCCTGTN
 C T A G A C G T C T A G A C T G A G T C A G T C A C G T A C T G A G T C A G T C
T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTRKCCTGCY------
-NNTCCTGCTGTGNNN
 C T A G A C G T C T A G A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTRKCCTGCY------
-TCNCCTGCTGNGNNN
 C T A G A C G T C T A G A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTRKCCTGCY
ACATCCTGNT
 C T A G A C G T C T A G A C T G A G T C A G T C A C G T A C T G A G T C A G T C
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTRKCCTGCY
ATTTCCTGTN
 C T A G A C G T C T A G A C T G A G T C A G T C A C G T A C T G A G T C A G T C
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTRKCCTGCY---
-CCCCCTGCTGTG
 C T A G A C G T C T A G A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GTRKCCTGCY----
----CCTGCTGAGH
 C T A G A C G T C T A G A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTRKCCTGCY----
GGCCYCCTGCTGDGH
 A C G T C T A G A C G T C T A G A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTRKCCTGCY
GTGACCTT--
 C T A G A C G T C T A G A C T G A G T C A G T C A C G T A C T G A G T C A G T C
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T