Information for 9-CRGAKTTKTCWGA (Motif 15)

A G T C C T A G A C T G C G T A A C G T A C G T A C G T A C T G C G A T A G T C G C T A A C T G C G T A
Reverse Opposite:
A C G T A G T C C G A T A C T G C G T A G T A C C G T A C G T A T G C A A C G T A G T C A G T C A C T G
p-value:1e-9
log p-value:-2.258e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.5 +/- 20.0bp
Average Position of motif in Background41.0 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CRGAKTTKTCWGA--
---NTTTCTNAGAAA
 A G T C C T A G A C T G C G T A A C G T A C G T A C G T A C T G C G A T A G T C G C T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CRGAKTTKTCWGA---
--NNTTTTTCTTATNT
 A G T C C T A G A C T G C G T A A C G T A C G T A C G T A C T G C G A T A G T C G C T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CRGAKTTKTCWGA
-----YTGWCADY
 A G T C C T A G A C T G C G T A A C G T A C G T A C G T A C T G C G A T A G T C G C T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CRGAKTTKTCWGA--
-AAAATTGTTATGAA
 A G T C C T A G A C T G C G T A A C G T A C G T A C G T A C T G C G A T A G T C G C T A A C T G C G T A A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CRGAKTTKTCWGA
-----NTGTCAN-
 A G T C C T A G A C T G C G T A A C G T A C G T A C G T A C T G C G A T A G T C G C T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CRGAKTTKTCWGA
CNGTGATTTN-----
 A C G T A C G T A G T C C T A G A C T G C G T A A C G T A C G T A C G T A C T G C G A T A G T C G C T A A C T G C G T A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CRGAKTTKTCWGA---
GNNATTTGTCGTAANN
 A G T C C T A G A C T G C G T A A C G T A C G T A C G T A C T G C G A T A G T C G C T A A C T G C G T A A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CRGAKTTKTCWGA
GGGAATTTCC---
 A G T C C T A G A C T G C G T A A C G T A C G T A C G T A C T G C G A T A G T C G C T A A C T G C G T A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CRGAKTTKTCWGA
CATCCAGATGTTC----
 A C G T A C G T A C G T A C G T A G T C C T A G A C T G C G T A A C G T A C G T A C G T A C T G C G A T A G T C G C T A A C T G C G T A
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CRGAKTTKTCWGA
-----TWGTCTGV
 A G T C C T A G A C T G C G T A A C G T A C G T A C G T A C T G C G A T A G T C G C T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G