Information for 9-ATCTTGTTCC (Motif 13)

C T G A A C G T A G T C A C G T C G A T A T C G C G A T A C G T A G T C A T G C
Reverse Opposite:
A T C G T A C G C G T A C G T A A T G C C G T A C G T A A C T G T G C A G A C T
p-value:1e-10
log p-value:-2.384e+01
Information Content per bp:1.836
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif82.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets56.9 +/- 25.4bp
Average Position of motif in Background44.5 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATCTTGTTCC---
AANTTATTGTTCTNNA
 A C G T A C G T A C G T C T G A A C G T A G T C A C G T C G A T A T C G C G A T A C G T A G T C A T G C A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATCTTGTTCC---
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T C T G A A C G T A G T C A C G T C G A T A T C G C G A T A C G T A G T C A T G C A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATCTTGTTCC----
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T C T G A A C G T A G T C A C G T C G A T A T C G C G A T A C G T A G T C A T G C A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATCTTGTTCC
--ATTGTT--
 C T G A A C G T A G T C A C G T C G A T A T C G C G A T A C G T A G T C A T G C
A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATCTTGTTCC----
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T C T G A A C G T A G T C A C G T C G A T A T C G C G A T A C G T A G T C A T G C A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATCTTGTTCC
GKMTCADRTTWC
 A C G T A C G T C T G A A C G T A G T C A C G T C G A T A T C G C G A T A C G T A G T C A T G C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATCTTGTTCC---
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T C T G A A C G T A G T C A C G T C G A T A T C G C G A T A C G T A G T C A T G C A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATCTTGTTCC
GKVTCADRTTWC
 A C G T A C G T C T G A A C G T A G T C A C G T C G A T A T C G C G A T A C G T A G T C A T G C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATCTTGTTCC-
-TKCTGTTCCA
 C T G A A C G T A G T C A C G T C G A T A T C G C G A T A C G T A G T C A T G C A C G T
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

PB0065.1_Sox15_1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATCTTGTTCC---
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T A C G T C T G A A C G T A G T C A C G T C G A T A T C G C G A T A C G T A G T C A T G C A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A