Information for 4-GRTRSAGAMSTGC (Motif 9)

A C T G C T G A A C G T T C A G A T C G C G T A A C T G C G T A G T C A A T G C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A T C G C A G T A C G T A G T C A C G T A T G C A G T C C G T A G A C T A G T C
p-value:1e-13
log p-value:-3.062e+01
Information Content per bp:1.836
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.6 +/- 24.4bp
Average Position of motif in Background64.7 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GRTRSAGAMSTGC
GGTTAGAGACCT--
 A C G T A C T G C T G A A C G T T C A G A T C G C G T A A C T G C G T A G T C A A T G C A C G T A C T G A G T C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GRTRSAGAMSTGC
-----RTACGTGC
 A C T G C T G A A C G T T C A G A T C G C G T A A C T G C G T A G T C A A T G C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GRTRSAGAMSTGC
---GGGTACGTGC
 A C T G C T G A A C G T T C A G A T C G C G T A A C T G C G T A G T C A A T G C A C G T A C T G A G T C
A C G T A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

ZBTB18/MA0698.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GRTRSAGAMSTGC
CATCCAGATGTTC
 A C T G C T G A A C G T T C A G A T C G C G T A A C T G C G T A G T C A A T G C A C G T A C T G A G T C
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GRTRSAGAMSTGC-
------TACGTGCV
 A C T G C T G A A C G T T C A G A T C G C G T A A C T G C G T A G T C A A T G C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GRTRSAGAMSTGC
-----GGACGTGC
 A C T G C T G A A C G T T C A G A T C G C G T A A C T G C G T A G T C A A T G C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

Hes2/MA0616.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GRTRSAGAMSTGC
TAACGACACGTGC
 A C T G C T G A A C G T T C A G A T C G C G T A A C T G C G T A G T C A A T G C A C G T A C T G A G T C
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GRTRSAGAMSTGC
AAAGRGGAAGTG-
 A C T G C T G A A C G T T C A G A T C G C G T A A C T G C G T A G T C A A T G C A C G T A C T G A G T C
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T

Npas2/MA0626.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GRTRSAGAMSTGC-
----NACACGTGCN
 A C T G C T G A A C G T T C A G A T C G C G T A A C T G C G T A G T C A A T G C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GRTRSAGAMSTGC
---CCAGACRSVB
 A C T G C T G A A C G T T C A G A T C G C G T A A C T G C G T A G T C A A T G C A C G T A C T G A G T C
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C