Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 754)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47768)	% of Background Sequences with Motif
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-119	-2.747e+02	0.0000	238.0	31.56%	2364.5	4.95%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-104	-2.415e+02	0.0000	180.0	23.87%	1398.7	2.93%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-98	-2.267e+02	0.0000	193.0	25.60%	1821.3	3.81%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-60	-1.392e+02	0.0000	116.0	15.38%	1021.9	2.14%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-58	-1.337e+02	0.0000	124.0	16.45%	1260.0	2.64%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-58	-1.336e+02	0.0000	134.0	17.77%	1502.5	3.15%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-55	-1.289e+02	0.0000	113.0	14.99%	1063.5	2.23%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-53	-1.240e+02	0.0000	104.0	13.79%	919.2	1.93%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-51	-1.196e+02	0.0000	114.0	15.12%	1193.4	2.50%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-50	-1.152e+02	0.0000	84.0	11.14%	603.2	1.26%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-45	-1.044e+02	0.0000	69.0	9.15%	423.6	0.89%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-18	-4.202e+01	0.0000	39.0	5.17%	395.2	0.83%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-16	-3.770e+01	0.0000	73.0	9.68%	1487.0	3.11%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-16	-3.712e+01	0.0000	90.0	11.94%	2132.4	4.47%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-14	-3.418e+01	0.0000	70.0	9.28%	1484.8	3.11%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-13	-3.100e+01	0.0000	73.0	9.68%	1699.5	3.56%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-4	-1.082e+01	0.0004	32.0	4.24%	885.1	1.85%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e-4	-1.064e+01	0.0005	82.0	10.88%	3248.6	6.80%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-4	-1.061e+01	0.0005	50.0	6.63%	1690.9	3.54%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-4	-1.045e+01	0.0005	45.0	5.97%	1471.8	3.08%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-4	-1.029e+01	0.0006	9.0	1.19%	98.8	0.21%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-4	-1.023e+01	0.0006	61.0	8.09%	2240.6	4.69%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-4	-1.016e+01	0.0006	29.0	3.85%	792.8	1.66%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-4	-9.636e+00	0.0010	18.0	2.39%	388.0	0.81%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-4	-9.540e+00	0.0010	8.0	1.06%	84.1	0.18%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-3	-9.119e+00	0.0015	11.0	1.46%	170.7	0.36%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-3	-8.975e+00	0.0017	38.0	5.04%	1246.2	2.61%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-3	-8.713e+00	0.0021	74.0	9.81%	3029.9	6.35%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-3	-8.419e+00	0.0028	66.0	8.75%	2649.3	5.55%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-3	-7.419e+00	0.0073	40.0	5.31%	1448.4	3.03%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-3	-7.226e+00	0.0085	36.0	4.77%	1272.1	2.66%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e-3	-7.171e+00	0.0087	33.0	4.38%	1135.2	2.38%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-3	-7.161e+00	0.0087	16.0	2.12%	398.1	0.83%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-2	-6.746e+00	0.0126	40.0	5.31%	1502.7	3.15%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-2	-6.504e+00	0.0156	23.0	3.05%	722.5	1.51%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e-2	-6.495e+00	0.0156	28.0	3.71%	949.5	1.99%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-2	-6.365e+00	0.0169	56.0	7.43%	2347.7	4.92%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-2	-6.159e+00	0.0203	93.0	12.33%	4365.3	9.14%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-2	-6.128e+00	0.0204	9.0	1.19%	175.3	0.37%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-2	-6.083e+00	0.0208	11.0	1.46%	247.5	0.52%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-2	-6.061e+00	0.0208	29.0	3.85%	1026.2	2.15%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-2	-6.016e+00	0.0212	22.0	2.92%	706.9	1.48%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e-2	-5.984e+00	0.0213	20.0	2.65%	619.6	1.30%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-2	-5.898e+00	0.0227	37.0	4.91%	1427.2	2.99%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-2	-5.693e+00	0.0273	46.0	6.10%	1902.2	3.98%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-2	-5.505e+00	0.0322	34.0	4.51%	1313.4	2.75%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-2	-5.361e+00	0.0364	27.0	3.58%	983.4	2.06%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e-2	-5.293e+00	0.0381	49.0	6.50%	2102.1	4.40%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e-2	-5.271e+00	0.0382	29.0	3.85%	1087.8	2.28%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-2	-5.120e+00	0.0435	19.0	2.52%	625.3	1.31%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e-2	-4.763e+00	0.0610	5.0	0.66%	78.1	0.16%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-2	-4.661e+00	0.0662	37.0	4.91%	1547.4	3.24%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-2	-4.619e+00	0.0677	53.0	7.03%	2399.8	5.03%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e-1	-4.520e+00	0.0734	11.0	1.46%	307.8	0.64%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-1	-4.468e+00	0.0759	19.0	2.52%	668.5	1.40%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-1	-4.449e+00	0.0759	52.0	6.90%	2368.9	4.96%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-1	-4.388e+00	0.0794	97.0	12.86%	4896.0	10.25%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-1	-4.362e+00	0.0800	25.0	3.32%	967.0	2.03%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-1	-4.161e+00	0.0962	21.0	2.79%	787.7	1.65%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-1	-3.937e+00	0.1183	60.0	7.96%	2885.0	6.04%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-1	-3.918e+00	0.1186	31.0	4.11%	1316.8	2.76%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e-1	-3.847e+00	0.1254	13.0	1.72%	430.6	0.90%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-1	-3.821e+00	0.1266	39.0	5.17%	1751.2	3.67%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-1	-3.767e+00	0.1315	39.0	5.17%	1758.7	3.68%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-1	-3.432e+00	0.1809	4.0	0.53%	75.7	0.16%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-1	-3.426e+00	0.1809	53.0	7.03%	2578.2	5.40%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e-1	-3.325e+00	0.1953	14.0	1.86%	512.3	1.07%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-1	-3.306e+00	0.1962	12.0	1.59%	418.1	0.88%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-1	-3.285e+00	0.1975	65.0	8.62%	3282.5	6.87%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-1	-3.242e+00	0.2032	7.0	0.93%	197.7	0.41%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-1	-3.222e+00	0.2045	27.0	3.58%	1185.3	2.48%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e-1	-3.195e+00	0.2070	10.0	1.33%	332.4	0.70%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e-1	-3.134e+00	0.2171	6.0	0.80%	160.1	0.34%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e-1	-3.065e+00	0.2294	13.0	1.72%	483.1	1.01%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-1	-3.037e+00	0.2330	2.0	0.27%	22.8	0.05%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-1	-3.005e+00	0.2373	28.0	3.71%	1265.5	2.65%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e-1	-2.970e+00	0.2425	31.0	4.11%	1432.2	3.00%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e-1	-2.945e+00	0.2454	30.0	3.98%	1381.3	2.89%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e-1	-2.933e+00	0.2454	57.0	7.56%	2894.8	6.06%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-1	-2.879e+00	0.2556	30.0	3.98%	1390.7	2.91%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-1	-2.820e+00	0.2679	27.0	3.58%	1235.0	2.59%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-1	-2.756e+00	0.2820	70.0	9.28%	3682.9	7.71%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-1	-2.699e+00	0.2949	90.0	11.94%	4870.3	10.20%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-1	-2.665e+00	0.3017	18.0	2.39%	773.3	1.62%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e-1	-2.638e+00	0.3063	42.0	5.57%	2096.4	4.39%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-1	-2.586e+00	0.3187	24.0	3.18%	1103.7	2.31%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-1	-2.544e+00	0.3286	51.0	6.76%	2628.7	5.51%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-1	-2.522e+00	0.3322	13.0	1.72%	528.2	1.11%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e-1	-2.447e+00	0.3539	7.0	0.93%	238.6	0.50%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e-1	-2.438e+00	0.3539	36.0	4.77%	1792.2	3.75%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-1	-2.377e+00	0.3714	12.0	1.59%	490.3	1.03%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-1	-2.329e+00	0.3855	59.0	7.82%	3140.5	6.58%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e-1	-2.317e+00	0.3859	4.0	0.53%	110.7	0.23%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-1	-2.311e+00	0.3859	10.0	1.33%	394.5	0.83%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e-1	-2.303e+00	0.3859	87.0	11.54%	4802.1	10.06%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-2.248e+00	0.4005	6.0	0.80%	203.1	0.43%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-2.208e+00	0.4124	14.0	1.86%	611.3	1.28%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-2.164e+00	0.4266	6.0	0.80%	208.7	0.44%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-2.119e+00	0.4417	34.0	4.51%	1736.9	3.64%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-2.102e+00	0.4449	10.0	1.33%	413.0	0.86%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-2.080e+00	0.4501	26.0	3.45%	1288.9	2.70%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-2.068e+00	0.4514	79.0	10.48%	4394.4	9.20%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-2.048e+00	0.4561	27.0	3.58%	1350.1	2.83%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-2.028e+00	0.4606	12.0	1.59%	524.9	1.10%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-2.004e+00	0.4674	68.0	9.02%	3756.9	7.87%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-2.000e+00	0.4674	23.0	3.05%	1132.1	2.37%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-1.966e+00	0.4761	61.0	8.09%	3350.7	7.02%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-1.951e+00	0.4792	74.0	9.81%	4130.2	8.65%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-1.944e+00	0.4792	2.0	0.27%	42.0	0.09%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.929e+00	0.4806	36.0	4.77%	1889.7	3.96%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.929e+00	0.4806	24.0	3.18%	1200.2	2.51%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.921e+00	0.4806	4.0	0.53%	128.1	0.27%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-1.908e+00	0.4806	13.0	1.72%	591.5	1.24%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.862e+00	0.4962	15.0	1.99%	706.3	1.48%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.844e+00	0.5005	27.0	3.58%	1386.7	2.90%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-1.834e+00	0.5011	23.0	3.05%	1159.1	2.43%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-1.832e+00	0.5011	3.0	0.40%	87.9	0.18%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.830e+00	0.5011	164.0	21.75%	9660.0	20.23%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.817e+00	0.5011	38.0	5.04%	2030.9	4.25%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-1.798e+00	0.5024	16.0	2.12%	770.8	1.61%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.793e+00	0.5024	30.0	3.98%	1569.4	3.29%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-1.793e+00	0.5024	55.0	7.29%	3041.2	6.37%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-1.781e+00	0.5024	22.0	2.92%	1111.2	2.33%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-1.780e+00	0.5024	146.0	19.36%	8574.1	17.96%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-1.764e+00	0.5024	10.0	1.33%	445.0	0.93%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-1.720e+00	0.5171	11.0	1.46%	504.6	1.06%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	-1.684e+00	0.5320	1.0	0.13%	13.8	0.03%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.663e+00	0.5390	69.0	9.15%	3920.9	8.21%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-1.663e+00	0.5390	24.0	3.18%	1247.4	2.61%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-1.655e+00	0.5390	3.0	0.40%	95.6	0.20%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-1.606e+00	0.5578	28.0	3.71%	1491.3	3.12%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.588e+00	0.5635	7.0	0.93%	302.0	0.63%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.563e+00	0.5732	28.0	3.71%	1500.6	3.14%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-1.556e+00	0.5732	39.0	5.17%	2152.0	4.51%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-1.542e+00	0.5772	27.0	3.58%	1446.7	3.03%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.533e+00	0.5780	39.0	5.17%	2158.0	4.52%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-1.513e+00	0.5849	57.0	7.56%	3244.3	6.79%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-1.508e+00	0.5849	68.0	9.02%	3912.7	8.19%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-1.485e+00	0.5931	10.0	1.33%	477.0	1.00%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-1.475e+00	0.5950	31.0	4.11%	1697.6	3.56%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-1.472e+00	0.5950	12.0	1.59%	591.4	1.24%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	-1.396e+00	0.6343	1.0	0.13%	18.9	0.04%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.386e+00	0.6366	47.0	6.23%	2680.1	5.61%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-1.367e+00	0.6441	4.0	0.53%	162.3	0.34%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-1.357e+00	0.6464	22.0	2.92%	1191.9	2.50%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.333e+00	0.6575	25.0	3.32%	1374.9	2.88%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.317e+00	0.6634	10.0	1.33%	499.3	1.05%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.311e+00	0.6634	5.0	0.66%	220.4	0.46%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-1.300e+00	0.6659	169.0	22.41%	10242.7	21.45%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-1.265e+00	0.6850	1.0	0.13%	21.9	0.05%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-1.242e+00	0.6959	22.0	2.92%	1216.9	2.55%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-1.240e+00	0.6959	10.0	1.33%	510.9	1.07%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-1.216e+00	0.7051	4.0	0.53%	174.8	0.37%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-1.211e+00	0.7051	14.0	1.86%	748.4	1.57%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-1.207e+00	0.7051	3.0	0.40%	121.6	0.25%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-1.203e+00	0.7051	54.0	7.16%	3168.6	6.64%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.194e+00	0.7051	2.0	0.27%	70.4	0.15%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.194e+00	0.7051	7.0	0.93%	345.0	0.72%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-1.179e+00	0.7051	19.0	2.52%	1051.7	2.20%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.173e+00	0.7051	14.0	1.86%	755.5	1.58%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-1.157e+00	0.7112	19.0	2.52%	1056.2	2.21%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-1.120e+00	0.7331	1.0	0.13%	25.5	0.05%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.112e+00	0.7347	18.0	2.39%	1006.5	2.11%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-1.110e+00	0.7347	14.0	1.86%	767.6	1.61%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-1.102e+00	0.7347	13.0	1.72%	709.9	1.49%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-1.096e+00	0.7347	56.0	7.43%	3332.6	6.98%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-1.076e+00	0.7430	57.0	7.56%	3402.7	7.13%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-1.074e+00	0.7430	23.0	3.05%	1317.3	2.76%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.060e+00	0.7464	15.0	1.99%	837.6	1.75%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-1.034e+00	0.7613	28.0	3.71%	1633.2	3.42%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-1.022e+00	0.7662	4.0	0.53%	192.0	0.40%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.019e+00	0.7662	7.0	0.93%	367.3	0.77%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.009e+00	0.7675	10.0	1.33%	547.6	1.15%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.006e+00	0.7675	27.0	3.58%	1580.1	3.31%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.006e+00	0.7675	2.0	0.27%	81.0	0.17%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-9.781e-01	0.7777	7.0	0.93%	373.7	0.78%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-9.745e-01	0.7777	9.0	1.19%	493.4	1.03%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-9.591e-01	0.7837	28.0	3.71%	1656.1	3.47%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-9.545e-01	0.7837	21.0	2.79%	1227.6	2.57%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-9.510e-01	0.7837	17.0	2.25%	983.5	2.06%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-9.234e-01	0.7943	3.0	0.40%	144.7	0.30%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-9.234e-01	0.7943	3.0	0.40%	144.7	0.30%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-9.231e-01	0.7943	26.0	3.45%	1544.4	3.23%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-9.008e-01	0.8037	1.0	0.13%	33.6	0.07%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-8.801e-01	0.8160	30.0	3.98%	1806.6	3.78%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-8.684e-01	0.8212	34.0	4.51%	2059.7	4.31%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-8.584e-01	0.8250	129.0	17.11%	8019.8	16.80%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-8.533e-01	0.8250	21.0	2.79%	1256.3	2.63%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-8.512e-01	0.8250	4.0	0.53%	211.5	0.44%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-8.475e-01	0.8250	62.0	8.22%	3818.8	8.00%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-8.433e-01	0.8250	54.0	7.16%	3319.8	6.95%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-8.431e-01	0.8250	15.0	1.99%	887.4	1.86%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-8.189e-01	0.8315	71.0	9.42%	4398.1	9.21%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-8.164e-01	0.8315	39.0	5.17%	2392.8	5.01%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-8.075e-01	0.8325	18.0	2.39%	1083.7	2.27%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-7.961e-01	0.8377	3.0	0.40%	157.9	0.33%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-7.936e-01	0.8377	7.0	0.93%	403.7	0.85%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-7.889e-01	0.8377	17.0	2.25%	1026.7	2.15%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-7.837e-01	0.8377	18.0	2.39%	1090.5	2.28%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-7.734e-01	0.8377	4.0	0.53%	221.6	0.46%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-7.734e-01	0.8377	4.0	0.53%	221.4	0.46%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-7.608e-01	0.8420	3.0	0.40%	161.8	0.34%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-7.482e-01	0.8485	55.0	7.29%	3430.8	7.19%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-7.473e-01	0.8485	2.0	0.27%	101.0	0.21%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-7.422e-01	0.8485	65.0	8.62%	4064.3	8.51%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-7.388e-01	0.8485	28.0	3.71%	1733.1	3.63%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-7.362e-01	0.8485	9.0	1.19%	539.6	1.13%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-7.355e-01	0.8485	3.0	0.40%	164.3	0.34%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-7.280e-01	0.8485	8.0	1.06%	478.2	1.00%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-7.218e-01	0.8485	47.0	6.23%	2939.5	6.16%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-7.210e-01	0.8485	5.0	0.66%	291.7	0.61%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-7.089e-01	0.8485	7.0	0.93%	419.6	0.88%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-6.951e-01	0.8528	3.0	0.40%	169.8	0.36%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-6.942e-01	0.8528	11.0	1.46%	675.9	1.42%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-6.928e-01	0.8528	20.0	2.65%	1245.7	2.61%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-6.684e-01	0.8637	59.0	7.82%	3728.5	7.81%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-6.663e-01	0.8637	40.0	5.31%	2524.1	5.29%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-6.623e-01	0.8637	12.0	1.59%	747.5	1.57%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-6.512e-01	0.8667	141.0	18.70%	8940.2	18.72%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-6.508e-01	0.8667	4.0	0.53%	239.2	0.50%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-6.491e-01	0.8667	15.0	1.99%	942.2	1.97%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-6.446e-01	0.8667	4.0	0.53%	240.5	0.50%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-6.416e-01	0.8667	7.0	0.93%	433.5	0.91%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-6.338e-01	0.8667	9.0	1.19%	564.0	1.18%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-6.235e-01	0.8672	7.0	0.93%	437.8	0.92%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-6.158e-01	0.8701	18.0	2.39%	1145.4	2.40%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-6.122e-01	0.8701	28.0	3.71%	1786.8	3.74%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-6.113e-01	0.8701	85.0	11.27%	5418.4	11.35%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-6.106e-01	0.8701	44.0	5.84%	2808.9	5.88%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-6.085e-01	0.8701	4.0	0.53%	246.9	0.52%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-6.082e-01	0.8701	5.0	0.66%	311.8	0.65%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-5.898e-01	0.8701	114.0	15.12%	7280.8	15.25%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-5.868e-01	0.8701	2.0	0.27%	118.3	0.25%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-5.797e-01	0.8712	28.0	3.71%	1801.1	3.77%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-5.704e-01	0.8756	18.0	2.39%	1162.2	2.43%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-5.654e-01	0.8762	9.0	1.19%	581.9	1.22%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-5.649e-01	0.8762	8.0	1.06%	516.1	1.08%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-5.631e-01	0.8762	63.0	8.36%	4051.4	8.49%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-5.605e-01	0.8762	127.0	16.84%	8134.7	17.04%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-5.569e-01	0.8762	219.0	29.05%	13986.1	29.29%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-5.529e-01	0.8762	6.0	0.80%	388.7	0.81%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-5.432e-01	0.8762	3.0	0.40%	191.1	0.40%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-5.214e-01	0.8893	1.0	0.13%	57.8	0.12%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-5.153e-01	0.8911	13.0	1.72%	858.2	1.80%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-5.107e-01	0.8916	17.0	2.25%	1121.7	2.35%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-5.074e-01	0.8916	172.0	22.81%	11055.6	23.15%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-5.062e-01	0.8916	82.0	10.88%	5311.6	11.12%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-5.003e-01	0.8916	1.0	0.13%	59.4	0.12%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-4.924e-01	0.8934	4.0	0.53%	268.4	0.56%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-4.912e-01	0.8934	82.0	10.88%	5324.8	11.15%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-4.867e-01	0.8934	41.0	5.44%	2690.8	5.64%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-4.864e-01	0.8934	5.0	0.66%	337.4	0.71%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-4.858e-01	0.8934	11.0	1.46%	737.6	1.54%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-4.834e-01	0.8934	77.0	10.21%	5010.1	10.49%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-4.803e-01	0.8934	12.0	1.59%	805.9	1.69%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-4.673e-01	0.8934	13.0	1.72%	876.8	1.84%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-4.613e-01	0.8934	1.0	0.13%	63.5	0.13%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-4.578e-01	0.8934	5.0	0.66%	344.8	0.72%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-4.560e-01	0.8934	7.0	0.93%	480.5	1.01%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-4.460e-01	0.8962	7.0	0.93%	483.4	1.01%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-4.443e-01	0.8962	3.0	0.40%	209.3	0.44%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-4.423e-01	0.8962	31.0	4.11%	2069.4	4.33%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-4.255e-01	0.9044	22.0	2.92%	1489.8	3.12%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-4.239e-01	0.9044	21.0	2.79%	1424.3	2.98%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-4.167e-01	0.9055	9.0	1.19%	628.7	1.32%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-4.158e-01	0.9055	6.0	0.80%	424.4	0.89%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-4.028e-01	0.9113	76.0	10.08%	5020.8	10.52%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-4.002e-01	0.9113	8.0	1.06%	566.5	1.19%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-3.940e-01	0.9113	4.0	0.53%	291.0	0.61%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-3.940e-01	0.9113	4.0	0.53%	291.7	0.61%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-3.872e-01	0.9120	7.0	0.93%	503.0	1.05%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-3.822e-01	0.9132	9.0	1.19%	641.9	1.34%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-3.730e-01	0.9182	2.0	0.27%	151.3	0.32%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-3.721e-01	0.9182	23.0	3.05%	1586.9	3.32%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-3.680e-01	0.9182	4.0	0.53%	298.7	0.63%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-3.664e-01	0.9182	71.0	9.42%	4733.5	9.91%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-3.635e-01	0.9182	3.0	0.40%	228.0	0.48%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-3.632e-01	0.9182	22.0	2.92%	1525.3	3.19%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-3.516e-01	0.9182	3.0	0.40%	230.4	0.48%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-3.405e-01	0.9249	161.0	21.35%	10570.6	22.14%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-3.380e-01	0.9249	30.0	3.98%	2074.2	4.34%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-3.319e-01	0.9263	1.0	0.13%	80.7	0.17%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-3.230e-01	0.9312	31.0	4.11%	2152.1	4.51%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-3.200e-01	0.9312	60.0	7.96%	4065.1	8.51%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-3.128e-01	0.9341	22.0	2.92%	1558.4	3.26%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-3.042e-01	0.9389	68.0	9.02%	4606.1	9.65%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-2.979e-01	0.9415	99.0	13.13%	6633.9	13.89%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-2.887e-01	0.9469	36.0	4.77%	2514.2	5.27%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-2.875e-01	0.9469	3.0	0.40%	248.7	0.52%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-2.872e-01	0.9469	62.0	8.22%	4233.2	8.87%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-2.851e-01	0.9469	2.0	0.27%	171.5	0.36%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-2.809e-01	0.9469	1.0	0.13%	90.0	0.19%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-2.538e-01	0.9638	23.0	3.05%	1671.6	3.50%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-2.457e-01	0.9684	4.0	0.53%	339.9	0.71%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-2.431e-01	0.9684	1.0	0.13%	97.4	0.20%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-2.382e-01	0.9690	17.0	2.25%	1273.0	2.67%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-2.276e-01	0.9762	10.0	1.33%	788.2	1.65%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-2.245e-01	0.9762	3.0	0.40%	270.4	0.57%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-2.186e-01	0.9784	22.0	2.92%	1634.5	3.42%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-2.103e-01	0.9833	7.0	0.93%	581.9	1.22%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-2.063e-01	0.9839	9.0	1.19%	730.1	1.53%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.995e-01	0.9873	12.0	1.59%	951.1	1.99%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-1.867e-01	0.9968	62.0	8.22%	4373.2	9.16%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.858e-01	0.9968	16.0	2.12%	1247.1	2.61%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.813e-01	0.9968	2.0	0.27%	205.9	0.43%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.690e-01	1.0000	5.0	0.66%	455.7	0.95%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.665e-01	1.0000	12.0	1.59%	979.1	2.05%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-1.622e-01	1.0000	9.0	1.19%	763.0	1.60%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.579e-01	1.0000	28.0	3.71%	2117.4	4.43%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.545e-01	1.0000	3.0	0.40%	303.1	0.63%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-1.486e-01	1.0000	83.0	11.01%	5843.8	12.24%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-1.473e-01	1.0000	9.0	1.19%	776.6	1.63%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-1.398e-01	1.0000	9.0	1.19%	783.7	1.64%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.349e-01	1.0000	5.0	0.66%	479.6	1.00%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.336e-01	1.0000	2.0	0.27%	228.3	0.48%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-1.303e-01	1.0000	23.0	3.05%	1807.7	3.79%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-1.138e-01	1.0000	1.0	0.13%	142.0	0.30%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.103e-01	1.0000	63.0	8.36%	4597.7	9.63%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-1.047e-01	1.0000	57.0	7.56%	4205.1	8.81%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-1.029e-01	1.0000	1.0	0.13%	147.8	0.31%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-1.021e-01	1.0000	4.0	0.53%	425.4	0.89%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-9.840e-02	1.0000	36.0	4.77%	2778.0	5.82%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-9.130e-02	1.0000	11.0	1.46%	992.5	2.08%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-8.870e-02	1.0000	25.0	3.32%	2023.2	4.24%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-8.609e-02	1.0000	2.0	0.27%	261.5	0.55%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-7.737e-02	1.0000	2.0	0.27%	269.3	0.56%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-7.269e-02	1.0000	1.0	0.13%	168.7	0.35%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-7.025e-02	1.0000	3.0	0.40%	371.5	0.78%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-6.696e-02	1.0000	1.0	0.13%	173.8	0.36%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-6.540e-02	1.0000	4.0	0.53%	467.7	0.98%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-6.330e-02	1.0000	2.0	0.27%	284.8	0.60%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-5.748e-02	1.0000	39.0	5.17%	3105.1	6.50%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-5.156e-02	1.0000	1.0	0.13%	189.1	0.40%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-4.210e-02	1.0000	48.0	6.37%	3807.5	7.97%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-3.703e-02	1.0000	9.0	1.19%	949.3	1.99%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-3.582e-02	1.0000	58.0	7.69%	4545.0	9.52%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-3.404e-02	1.0000	2.0	0.27%	330.7	0.69%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-3.260e-02	1.0000	48.0	6.37%	3863.6	8.09%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-3.136e-02	1.0000	4.0	0.53%	534.2	1.12%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-3.040e-02	1.0000	23.0	3.05%	2064.1	4.32%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-2.337e-02	1.0000	1.0	0.13%	238.7	0.50%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-2.304e-02	1.0000	7.0	0.93%	833.6	1.75%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.496e-02	1.0000	19.0	2.52%	1865.7	3.91%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-1.338e-02	1.0000	55.0	7.29%	4548.5	9.53%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-8.508e-03	1.0000	19.0	2.52%	1943.8	4.07%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-7.056e-03	1.0000	66.0	8.75%	5464.4	11.44%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-2.676e-03	1.0000	53.0	7.03%	4708.8	9.86%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-1.823e-03	1.0000	29.0	3.85%	2948.6	6.18%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-1.075e-03	1.0000	4.0	0.53%	816.1	1.71%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-9.740e-04	1.0000	41.0	5.44%	3972.1	8.32%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-6.360e-04	1.0000	15.0	1.99%	1920.0	4.02%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	68.6	0.14%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	64.2	0.13%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	32.5	0.07%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	0.000e+00	1.0000	0.0	0.00%	99.1	0.21%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	19.0	0.04%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	8.8	0.02%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	25.2	0.05%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	22.3	0.05%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	0.000e+00	1.0000	0.0	0.00%	139.1	0.29%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	81.5	0.17%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	18.3	0.04%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	1.8	0.00%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	27.5	0.06%