Information for 22-GTGACTTTTTAAACTC (Motif 30)

A C T G C G A T A C T G C G T A A T G C A C G T A C G T A C G T C G A T C G A T C G T A C G T A C G T A A T G C A C G T A G T C
Reverse Opposite:
A C T G C G T A A T C G A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A T C G A C G T A G T C G C T A G T A C
p-value:1e-3
log p-value:-9.001e+00
Information Content per bp:1.918
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.5 +/- 10.5bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTGACTTTTTAAACTC
-TGACCTTTTGACCTC
 A C T G C G A T A C T G C G T A A T G C A C G T A C G T A C G T C G A T C G A T C G T A C G T A C G T A A T G C A C G T A G T C
A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

Rarg/MA0859.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTGACTTTTTAAACTC
TTGACCTTTTGACCTT
 A C T G C G A T A C T G C G T A A T G C A C G T A C G T A C G T C G A T C G A T C G T A C G T A C G T A A T G C A C G T A G T C
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTGACTTTTTAAACTC
TTGACTTTT-------
 A C T G C G A T A C T G C G T A A T G C A C G T A C G T A C G T C G A T C G A T C G T A C G T A C G T A A T G C A C G T A G T C
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARA/MA0729.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGACTTTTTAAACTC
CATTGACCTTTTGACCTC
 A C G T A C G T A C T G C G A T A C T G C G T A A T G C A C G T A C G T A C G T C G A T C G A T C G T A C G T A C G T A A T G C A C G T A G T C
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTGACTTTTTAAACTC
NNNGTGACCTTTGNNN---
 A C G T A C G T A C G T A C T G C G A T A C T G C G T A A T G C A C G T A C G T A C G T C G A T C G A T C G T A C G T A C G T A A T G C A C G T A G T C
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GTGACTTTTTAAACTC
------TTTGAAACCG
 A C T G C G A T A C T G C G T A A T G C A C G T A C G T A C G T C G A T C G A T C G T A C G T A C G T A A T G C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Rarb/MA0857.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTGACTTTTTAAACTC-
-TGACCTTTTGACCTTT
 A C T G C G A T A C T G C G T A A T G C A C G T A C G T A C G T C G A T C G A T C G T A C G T A C G T A A T G C A C G T A G T C A C G T
A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTGACTTTTTAAACTC
NNNNTGACCTTTNNNN---
 A C G T A C G T A C G T A C T G C G A T A C T G C G T A A T G C A C G T A C G T A C G T C G A T C G A T C G T A C G T A C G T A A T G C A C G T A G T C
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GTGACTTTTTAAACTC
----CCTTTTATAGNC
 A C T G C G A T A C T G C G T A A T G C A C G T A C G T A C G T C G A T C G A T C G T A C G T A C G T A A T G C A C G T A G T C
A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTGACTTTTTAAACTC
-TGACCTTTNCNT---
 A C T G C G A T A C T G C G T A A T G C A C G T A C G T A C G T C G A T C G A T C G T A C G T A C G T A A T G C A C G T A G T C
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T A C G T