Information for 6-MTAACATGCCAAGGAA (Motif 7)

G T C A A C G T T G C A C G T A T A G C G T C A A C G T A T C G A T G C G T A C C G T A C T G A C T A G C T A G G C T A C G T A
Reverse Opposite:
C G A T C A G T G A T C A G T C G A C T A C G T A C T G A T C G T A G C C G T A A C G T A C T G C G A T A C G T C G T A A C G T
p-value:1e-12
log p-value:-2.969e+01
Information Content per bp:1.725
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.6 +/- 23.9bp
Average Position of motif in Background56.2 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:MTAACATGCCAAGGAA
-----TTGCCAAG---
 G T C A A C G T T G C A C G T A T A G C G T C A A C G T A T C G A T G C G T A C C G T A C T G A C T A G C T A G G C T A C G T A
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:MTAACATGCCAAGGAA-
---ACATGCCCGGGCAT
 G T C A A C G T T G C A C G T A T A G C G T C A A C G T A T C G A T G C G T A C C G T A C T G A C T A G C T A G G C T A C G T A A C G T
A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:MTAACATGCCAAGGAA
----GGTGCCAAGT--
 G T C A A C G T T G C A C G T A T A G C G T C A A C G T A T C G A T G C G T A C C G T A C T G A C T A G C T A G G C T A C G T A
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:MTAACATGCCAAGGAA
----CGTGCCAAG---
 G T C A A C G T T G C A C G T A T A G C G T C A A C G T A T C G A T G C G T A C C G T A C T G A C T A G C T A G G C T A C G T A
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:MTAACATGCCAAGGAA
------TGCCAA----
 G T C A A C G T T G C A C G T A T A G C G T C A A C G T A T C G A T G C G T A C C G T A C T G A C T A G C T A G G C T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:MTAACATGCCAAGGAA
---ARNTGACA-----
 G T C A A C G T T G C A C G T A T A G C G T C A A C G T A T C G A T G C G T A C C G T A C T G A C T A G C T A G G C T A C G T A
A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T

TP53/MA0106.3/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:MTAACATGCCAAGGAA----
--GACATGCCCGGGCATGTT
 G T C A A C G T T G C A C G T A T A G C G T C A A C G T A T C G A T G C G T A C C G T A C T G A C T A G C T A G G C T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T G A G A T C C G T A C G A T T A C G G A T C G A T C G A T C T C A G C T A G C T A G A G T C C G T A G C A T C T A G G A C T G A C T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:MTAACATGCCAAGGAA---
-----TTGCCATGGCAACC
 G T C A A C G T T G C A C G T A T A G C G T C A A C G T A T C G A T G C G T A C C G T A C T G A C T A G C T A G G C T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:MTAACATGCCAAGGAA
-----ATGCCAACC--
 G T C A A C G T T G C A C G T A T A G C G T C A A C G T A T C G A T G C G T A C C G T A C T G A C T A G C T A G G C T A C G T A
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:MTAACATGCCAAGGAA
----RHTGWCAR----
 G T C A A C G T T G C A C G T A T A G C G T C A A C G T A T C G A T G C G T A C C G T A C T G A C T A G C T A G G C T A C G T A
A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T