Information for 22-GAACTCATTCATTCTA (Motif 29)

T A C G C G T A C G T A T G A C A C G T G A T C C G T A G A C T A C G T G T A C G T C A A G C T A C G T A T G C A G C T C G T A
Reverse Opposite:
G C A T C T G A A T C G G T C A T C G A A C G T A C T G T C G A C T G A G C A T C T A G C G T A A C T G C G A T C G A T A T G C
p-value:1e-8
log p-value:-1.891e+01
Information Content per bp:1.705
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.1 +/- 31.5bp
Average Position of motif in Background75.8 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0028.1_En1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAACTCATTCATTCTA
GCGAACTAATTAATGC--
 A C G T A C G T T A C G C G T A C G T A T G A C A C G T G A T C C G T A G A C T A C G T G T A C G T C A A G C T A C G T A T G C A G C T C G T A
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C A C G T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAACTCATTCATTCTA
GACNTCATTAATAANN
 T A C G C G T A C G T A T G A C A C G T G A T C C G T A G A C T A C G T G T A C G T C A A G C T A C G T A T G C A G C T C G T A
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

PH0019.1_Dbx2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAACTCATTCATTCTA
NAATTAATTAATTNNN
 T A C G C G T A C G T A T G A C A C G T G A T C C G T A G A C T A C G T G T A C G T C A A G C T A C G T A T G C A G C T C G T A
C A T G C G T A T G C A G C A T G A C T G T C A G C T A G A C T G C A T C T G A C G T A G C A T C A G T C T G A G T C A T C G A

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GAACTCATTCATTCTA
AAGGCGAAATCATCGCA----
 A C G T A C G T A C G T A C G T A C G T T A C G C G T A C G T A T G A C A C G T G A T C C G T A G A C T A C G T G T A C G T C A A G C T A C G T A T G C A G C T C G T A
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T A C G T A C G T A C G T

PH0149.1_Pou3f4/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAACTCATTCATTCTA-
GANTTAATTAATTAANN
 T A C G C G T A C G T A T G A C A C G T G A T C C G T A G A C T A C G T G T A C G T C A A G C T A C G T A T G C A G C T C G T A A C G T
C T A G G C T A G T C A G A C T C G A T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A C G T A A C G T G A C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAACTCATTCATTCTA---
---NNCATTCATTCATNNN
 T A C G C G T A C G T A T G A C A C G T G A T C C G T A G A C T A C G T G T A C G T C A A G C T A C G T A T G C A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAACTCATTCATTCTA
GANGTAATTAATTANN
 T A C G C G T A C G T A T G A C A C G T G A T C C G T A G A C T A C G T G T A C G T C A A G C T A C G T A T G C A G C T C G T A
T C A G C T G A T G C A T C A G G A C T T G C A C G T A C G A T G A C T C T G A G C T A C G A T C G A T C T G A A G T C A G C T

PH0142.1_Pou1f1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAACTCATTCATTCTA-
GANTTAATTAATTANNN
 T A C G C G T A C G T A T G A C A C G T G A T C C G T A G A C T A C G T G T A C G T C A A G C T A C G T A T G C A G C T C G T A A C G T
T A C G G C T A G A T C G C A T C G A T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G T C A G C T A A G C T G A T C

PH0058.1_Hoxb3/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAACTCATTCATTCTA
TNNNACTAATTAGNTCA-
 A C G T A C G T T A C G C G T A C G T A T G A C A C G T G A T C C G T A G A C T A C G T G T A C G T C A A G C T A C G T A T G C A G C T C G T A
G C A T G A T C A G T C G T C A T C G A A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A T G C A C G T A G T C C G T A A C G T

PH0147.1_Pou3f2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAACTCATTCATTCTA
NNNACTAATTAATTANC
 A C G T T A C G C G T A C G T A T G A C A C G T G A T C C G T A G A C T A C G T G T A C G T C A A G C T A C G T A T G C A G C T C G T A
G A T C C T G A G T C A T G C A G A T C C A G T G T C A C G T A C G A T C A G T C T G A C T G A C A G T G C A T G C T A G C A T A T G C