Information for 20-GGCTBTAATCCBTTTT (Motif 27)

A C T G C T A G A G T C A C G T A C G T A C G T C T G A C G T A A C G T G T A C G T A C A C T G A C G T C G A T A G C T A C G T
Reverse Opposite:
C G T A C T G A C G T A C G T A T A G C C A T G A C T G T G C A A C G T A G C T G T C A T C G A C G T A C T A G A G T C A G T C
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.759
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.8 +/- 20.9bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0126.1_Obox6/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGCTBTAATCCBTTTT-
--CNATAATCCGNTTNT
 A C T G C T A G A G T C A C G T A C G T A C G T C T G A C G T A A C G T G T A C G T A C A C T G A C G T C G A T A G C T A C G T A C G T
A C G T A C G T T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGCTBTAATCCBTTTT
--CCTTAATNGNTTTT
 A C T G C T A G A G T C A C G T A C G T A C G T C T G A C G T A A C G T G T A C G T A C A C T G A C G T C G A T A G C T A C G T
A C G T A C G T A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

Crx/MA0467.1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GGCTBTAATCCBTTTT
----CTAATCCTCTT-
 A C T G C T A G A G T C A C G T A C G T A C G T C T G A C G T A A C G T G T A C G T A C A C T G A C G T C G A T A G C T A C G T
A C G T A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGCTBTAATCCBTTTT
AATCGTTAATCCCTTTA
 A C G T A C T G C T A G A G T C A C G T A C G T A C G T C T G A C G T A A C G T G T A C G T A C A C T G A C G T C G A T A G C T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGCTBTAATCCBTTTT
----TTAATCCT----
 A C T G C T A G A G T C A C G T A C G T A C G T C T G A C G T A A C G T G T A C G T A C A C T G A C G T C G A T A G C T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGCTBTAATCCBTTTT
----TTAATCCC----
 A C T G C T A G A G T C A C G T A C G T A C G T C T G A C G T A A C G T G T A C G T A C A C T G A C G T C G A T A G C T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGCTBTAATCCBTTTT
----TTAATCCG----
 A C T G C T A G A G T C A C G T A C G T A C G T C T G A C G T A A C G T G T A C G T A C A C T G A C G T C G A T A G C T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCTBTAATCCBTTTT-
NNNATTAATCCGNTTNA
 A C T G C T A G A G T C A C G T A C G T A C G T C T G A C G T A A C G T G T A C G T A C A C T G A C G T C G A T A G C T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCTBTAATCCBTTTT-
NNNATTAATCCGNTTNA
 A C T G C T A G A G T C A C G T A C G T A C G T C T G A C G T A A C G T G T A C G T A C A C T G A C G T C G A T A G C T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGCTBTAATCCBTTTT
---NYTAATCCYB---
 A C T G C T A G A G T C A C G T A C G T A C G T C T G A C G T A A C G T G T A C G T A C A C T G A C G T C G A T A G C T A C G T
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T