Information for 9-GMCTGGYTTGCAG (Motif 15)

C A T G G T A C A T G C A G C T A T C G A C T G A G T C A G C T A C G T A C T G A G T C G T C A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C C G T A T C G A C T A G A G T C T A G C C T G A T A C G A C T G G T A C
p-value:1e-10
log p-value:-2.527e+01
Information Content per bp:1.793
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets66.2 +/- 17.1bp
Average Position of motif in Background49.8 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GMCTGGYTTGCAG-------
---NNNANTGCAGTGCNNTT
 C A T G G T A C A T G C A G C T A T C G A C T G A G T C A G C T A C G T A C T G A G T C G T C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GMCTGGYTTGCAG---
GGGCCGTGTGCAAAAA
 C A T G G T A C A T G C A G C T A T C G A C T G A G T C A G C T A C G T A C T G A G T C G T C A A C T G A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GMCTGGYTTGCAG
---TTGCGTGCVA
 C A T G G T A C A T G C A G C T A T C G A C T G A G T C A G C T A C G T A C T G A G T C G T C A A C T G
A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GMCTGGYTTGCAG--
CCATTGTATGCAAAT
 C A T G G T A C A T G C A G C T A T C G A C T G A G T C A G C T A C G T A C T G A G T C G T C A A C T G A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GMCTGGYTTGCAG
NNACTTGCCTT---
 A C G T C A T G G T A C A T G C A G C T A T C G A C T G A G T C A G C T A C G T A C T G A G T C G T C A A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GMCTGGYTTGCAG--
NNGCGTGTGTGCNGCN
 A C G T C A T G G T A C A T G C A G C T A T C G A C T G A G T C A G C T A C G T A C T G A G T C G T C A A C T G A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GMCTGGYTTGCAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T C A T G G T A C A T G C A G C T A T C G A C T G A G T C A G C T A C G T A C T G A G T C G T C A A C T G A C G T A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GMCTGGYTTGCAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T C A T G G T A C A T G C A G C T A T C G A C T G A G T C A G C T A C G T A C T G A G T C G T C A A C T G A C G T A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GMCTGGYTTGCAG
----TGCGTG---
 C A T G G T A C A T G C A G C T A T C G A C T G A G T C A G C T A C G T A C T G A G T C G T C A A C T G
A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GMCTGGYTTGCAG-----
---TNTCCTGCTGTGNNG
 C A T G G T A C A T G C A G C T A T C G A C T G A G T C A G C T A C G T A C T G A G T C G T C A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G