Information for 4-GGCAGCAGAGGAA (Motif 4)

C T A G A C T G T A G C C G T A A C T G G T A C C G T A T A C G C T G A C T A G T C A G C T G A T C G A
Reverse Opposite:
A G C T G A C T A G T C A G T C A G C T A T G C C G A T A C T G T G A C C G A T A T C G A G T C A G T C
p-value:1e-15
log p-value:-3.573e+01
Information Content per bp:1.744
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.17%
Number of Background Sequences with motif177.4
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets53.2 +/- 27.9bp
Average Position of motif in Background49.2 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GGCAGCAGAGGAA
------AGAGGAA
 C T A G A C T G T A G C C G T A A C T G G T A C C G T A T A C G C T G A C T A G T C A G C T G A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GGCAGCAGAGGAA--
-----AACAGGAAGT
 C T A G A C T G T A G C C G T A A C T G G T A C C G T A T A C G C T G A C T A G T C A G C T G A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GGCAGCAGAGGAA---
------AGAGGAAGTG
 C T A G A C T G T A G C C G T A A C T G G T A C C G T A T A C G C T G A C T A G T C A G C T G A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGCAGAGGAA
TGAGTCAGCA------
 A C G T A C G T A C G T C T A G A C T G T A G C C G T A A C T G G T A C C G T A T A C G C T G A C T A G T C A G C T G A T C G A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGCAGAGGAA--
NNNAGATCAAAGGANNN
 A C G T A C G T C T A G A C T G T A G C C G T A A C T G G T A C C G T A T A C G C T G A C T A G T C A G C T G A T C G A A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGCAGAGGAA
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T C T A G A C T G T A G C C G T A A C T G G T A C C G T A T A C G C T G A C T A G T C A G C T G A T C G A
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGCAGCAGAGGAA----
-----NDCAGGAARTNN
 C T A G A C T G T A G C C G T A A C T G G T A C C G T A T A C G C T G A C T A G T C A G C T G A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGCAGCAGAGGAA-
GGTCANYTGAGGWCA
 A C G T C T A G A C T G T A G C C G T A A C T G G T A C C G T A T A C G C T G A C T A G T C A G C T G A T C G A A C G T
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCAGCAGAGGAA
-ACATCAAAGGNA
 C T A G A C T G T A G C C G T A A C T G G T A C C G T A T A C G C T G A C T A G T C A G C T G A T C G A
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCAGCAGAGGAA--
TATAGATCAAAGGAAAA
 A C G T A C G T C T A G A C T G T A G C C G T A A C T G G T A C C G T A T A C G C T G A C T A G T C A G C T G A T C G A A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A