Information for 8-GCAGCATCTCAAC (Motif 11)

A C T G A T G C C G T A C T A G A G T C G T C A A C G T A G T C A C G T A G T C G T C A G T C A G T A C
Reverse Opposite:
A C T G A C G T A C G T A C T G C G T A C T A G G T C A A C G T A C T G A G T C A C G T A T C G G T A C
p-value:1e-7
log p-value:-1.705e+01
Information Content per bp:1.838
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets39.9 +/- 27.0bp
Average Position of motif in Background42.5 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCAGCATCTCAAC
--AGCCACTCAAG
 A C T G A T G C C G T A C T A G A G T C G T C A A C G T A G T C A C G T A G T C G T C A G T C A G T A C
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCAGCATCTCAAC---
----SCTGTCARCACC
 A C T G A T G C C G T A C T A G A G T C G T C A A C G T A G T C A C G T A G T C G T C A G T C A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GCAGCATCTCAAC
ADGGYAGYAGCATCT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C C G T A C T A G A G T C G T C A A C G T A G T C A C G T A G T C G T C A G T C A G T A C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCAGCATCTCAAC
----CCTGTCAA-
 A C T G A T G C C G T A C T A G A G T C G T C A A C G T A G T C A C G T A G T C G T C A G T C A G T A C
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

Mafb/MA0117.2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCATCTCAAC
NGTCAGCANTTT---
 A C G T A C G T A C T G A T G C C G T A C T A G A G T C G T C A A C G T A G T C A C G T A G T C G T C A G T C A G T A C
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCAGCATCTCAAC
----GCTGTCAA-
 A C T G A T G C C G T A C T A G A G T C G T C A A C G T A G T C A C G T A G T C G T C A G T C A G T A C
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCAGCATCTCAAC---
-TACCATAGCAACGGT
 A C T G A T G C C G T A C T A G A G T C G T C A A C G T A G T C A C G T A G T C G T C A G T C A G T A C A C G T A C G T A C G T
A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCATCTCAAC
GTCAGCANNTN---
 A C G T A C T G A T G C C G T A C T A G A G T C G T C A A C G T A G T C A C G T A G T C G T C A G T C A G T A C
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GCAGCATCTCAAC
CTGAGTCAGCAATTT---
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C C G T A C T A G A G T C G T C A A C G T A G T C A C G T A G T C G T C A G T C A G T A C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCAGCATCTCAAC
AAGTCAGCANTTTTN-
 A C G T A C G T A C G T A C T G A T G C C G T A C T A G A G T C G T C A A C G T A G T C A C G T A G T C G T C A G T C A G T A C
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T