Information for 7-GGAAATGCCA (Motif 16)

A C T G A C T G G T C A T G C A C T G A C G A T A C T G A T G C G T A C C G T A
Reverse Opposite:
C G A T A C T G A T C G T G A C C G T A A G C T A C G T A C G T A G T C G T A C
p-value:1e-8
log p-value:-2.057e+01
Information Content per bp:1.852
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif105.7
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets52.1 +/- 23.6bp
Average Position of motif in Background53.2 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GGAAATGCCA
GGAAATTCCC
 A C T G A C T G G T C A T G C A C T G A C G A T A C T G A T G C G T A C C G T A
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GGAAATGCCA
GGAAATTCCC
 A C T G A C T G G T C A T G C A C T G A C G A T A C T G A T G C G T A C C G T A
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GGAAATGCCA
GGAAANCCCC
 A C T G A C T G G T C A T G C A C T G A C G A T A C T G A T G C G T A C C G T A
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GGAAATGCCA
GGAAATCCCC
 A C T G A C T G G T C A T G C A C T G A C G A T A C T G A T G C G T A C C G T A
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GGAAATGCCA-
GGGAAATCCCCN
 A C G T A C T G A C T G G T C A T G C A C T G A C G A T A C T G A T G C G T A C C G T A A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATGCCA
NACAGGAAAT----
 A C G T A C G T A C G T A C G T A C T G A C T G G T C A T G C A C T G A C G A T A C T G A T G C G T A C C G T A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGAAATGCCA--
--GCATTCCAGN
 A C T G A C T G G T C A T G C A C T G A C G A T A C T G A T G C G T A C C G T A A C G T A C G T
A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GGAAATGCCA---
----ATGCCAACC
 A C T G A C T G G T C A T G C A C T G A C G A T A C T G A T G C G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGAAATGCCA-
-CACATTCCAT
 A C T G A C T G G T C A T G C A C T G A C G A T A C T G A T G C G T A C C G T A A C G T
A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATGCCA
NNTGGAAANN---
 A C G T A C G T A C G T A C T G A C T G G T C A T G C A C T G A C G A T A C T G A T G C G T A C C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T