Information for 6-CGTCATGGCGCCG (Motif 13)

G T A C A T C G A G C T A G T C G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G T C A C T G
Reverse Opposite:
A G T C T C A G T C A G G A T C A C T G A G T C G T A C G C T A C A G T A C T G C T G A T A G C A C T G
p-value:1e-9
log p-value:-2.200e+01
Information Content per bp:1.792
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif65.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets41.7 +/- 24.4bp
Average Position of motif in Background49.8 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CGTCATGGCGCCG----
NNNNTTGGCGCCGANNN
 G T A C A T C G A G C T A G T C G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGTCATGGCGCCG----
NNNNTTGGCGCCGANNN
 G T A C A T C G A G C T A G T C G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CGTCATGGCGCCG-
------GGCGCGCT
 G T A C A T C G A G C T A G T C G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

E2F1/MA0024.3/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CGTCATGGCGCCG--
---TTTGGCGCCAAA
 G T A C A T C G A G C T A G T C G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G T C A C T G A C G T A C G T
A C G T A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGTCATGGCGCCG
---NTTGGCANN-
 G T A C A T C G A G C T A G T C G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G T C A C T G
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGTCATGGCGCCG
----TTGGCA---
 G T A C A T C G A G C T A G T C G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G T C A C T G
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CGTCATGGCGCCG
GTTGCCATGGCAAC-
 A C G T A C G T G T A C A T C G A G C T A G T C G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G T C A C T G
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGTCATGGCGCCG
AGTCACGC-----
 G T A C A T C G A G C T A G T C G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G T C A C T G
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGTCATGGCGCCG
TTGCCATGGCAACN
 A C G T G T A C A T C G A G C T A G T C G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G T C A C T G
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CGTCATGGCGCCG
--TAATGGCGGNC
 G T A C A T C G A G C T A G T C G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G T C A C T G
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C