Information for 4-HAGCAAGGAGAGGGGG (Motif 11)

G A C T C G T A A C T G A T G C C T G A C T G A A C T G C T A G C T G A A C T G G T C A A C T G C T A G A T C G A C T G A C T G
Reverse Opposite:
A G T C A G T C A T G C A G T C A G T C C A G T A G T C A G C T A G T C A G T C A G C T A G C T A T C G A G T C A C G T C G T A
p-value:1e-10
log p-value:-2.351e+01
Information Content per bp:1.828
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif18.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets60.6 +/- 29.4bp
Average Position of motif in Background46.7 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP1/MA0079.3/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:HAGCAAGGAGAGGGGG
-----GGGGGCGGGGC
 G A C T C G T A A C T G A T G C C T G A C T G A A C T G C T A G C T G A A C T G G T C A A C T G C T A G A T C G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:HAGCAAGGAGAGGGGG--
-NNTNNGGGGCGGNGNGN
 G A C T C G T A A C T G A T G C C T G A C T G A A C T G C T A G C T G A A C T G G T C A A C T G C T A G A T C G A C T G A C T G A C G T A C G T
A C G T C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

ZNF263/MA0528.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-HAGCAAGGAGAGGGGG----
GGAGGAGGAGGGGGAGGAGGA
 A C G T G A C T C G T A A C T G A T G C C T G A C T G A A C T G C T A G C T G A A C T G G T C A A C T G C T A G A T C G A C T G A C T G A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:HAGCAAGGAGAGGGGG
-GGGNGGGGGCGGGGC
 G A C T C G T A A C T G A T G C C T G A C T G A A C T G C T A G C T G A A C T G G T C A A C T G C T A G A T C G A C T G A C T G
A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:HAGCAAGGAGAGGGGG-----
-----TGCGGAGTGGGACTGG
 G A C T C G T A A C T G A T G C C T G A C T G A A C T G C T A G C T G A A C T G G T C A A C T G C T A G A T C G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:8
Orientation:forward strand
Alignment:HAGCAAGGAGAGGGGG
--------GGGGGGGG
 G A C T C G T A A C T G A T G C C T G A C T G A A C T G C T A G C T G A A C T G G T C A A C T G C T A G A T C G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--HAGCAAGGAGAGGGGG
CACAGCAGGGGG------
 A C G T A C G T G A C T C G T A A C T G A T G C C T G A C T G A A C T G C T A G C T G A A C T G G T C A A C T G C T A G A T C G A C T G A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:HAGCAAGGAGAGGGGG----
------ANTGCGGGGGCGGN
 G A C T C G T A A C T G A T G C C T G A C T G A A C T G C T A G C T G A A C T G G T C A A C T G C T A G A T C G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--HAGCAAGGAGAGGGGG
GGAAGGAAGGAAGGAAGG
 A C G T A C G T G A C T C G T A A C T G A T G C C T G A C T G A A C T G C T A G C T G A A C T G G T C A A C T G C T A G A T C G A C T G A C T G
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:HAGCAAGGAGAGGGGG--
----AGGGGGCGGGGCTG
 G A C T C G T A A C T G A T G C C T G A C T G A A C T G C T A G C T G A A C T G G T C A A C T G C T A G A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G